Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1244 |
Symbol | |
ID | 3518474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1275785 |
End bp | 1276666 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637283708 |
Product | LysR family transcriptional regulator |
Protein accession | YP_267987 |
Protein GI | 71278724 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGATAT TTACCCAAGT AGTTGAATGC GGAAGTTTTT CTGGTGCCGC GATAGCAACA GGTCATTCAA ATTCTTATAT CAGTAAAACA CTTAATAAAC TTGAAGCACG GGTCGGAGTT CGTTTATTAA ATCGAACCAC ACGATCAATC AGTTTGACTC CAGAAGGACA AGTGTATTAT GAACAATGCC AACAGTTAGT GCTCGATGCT CATGATGCAG TATCTCTATT AACGCAAAGT CATATAGAGC CTAAAGGCGT GCTTAAAATA AGCTGTCCGA CGTCGTTCGC AGAAAACCAC TTACAAGAGG TGATGTCAGC CTTTATGCAC CAGTATCCTG AAGTCAATTT GGTTTTAGAT TTAAATGATC GCCATGTCGA CTTAGTGCAA GATGGCTTTG ATTTAGTTAT TAGAGCCACA GATAAACTAG CAGAATCAAG CTTAGTTTGT CGCAAAATAT ATAGCTGCAA AGCTTATACT GTGGCATCAC ATGACTATTT GAAGCGCTTT GGTCTGCCGC AATCGCCAGA GCAACTCAGT GAGCATCAGT GCATTTGTTA CAGTAACTTA AAGCAAGCTA ACAAATGGAT TTACAGCCAT AGCAATGGCA CTGATAACCA AGTTGAAGTA AAAGCTAAAT TATTATGTAA TAGCGCCAGT ATGGAGTTAG CCATGGTACT GGCAGGTCAT GGTATTTGTA GATTACCCGC ATTTGTCATG GAAAAAGAAT TGCAAGATAA TAAGCTAGCC ATACTATTTA ATGATTACAT TACGCCAACC ATTGATGTCT ACGCAATTTA CCCAAGCCGA AAACACTTAT CACCTAAAGT GCGATGCTTT ATTGATTTAC TTGTTGATAA AATGCCCCGA TCGCTCCTAT AA
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Protein sequence | MVIFTQVVEC GSFSGAAIAT GHSNSYISKT LNKLEARVGV RLLNRTTRSI SLTPEGQVYY EQCQQLVLDA HDAVSLLTQS HIEPKGVLKI SCPTSFAENH LQEVMSAFMH QYPEVNLVLD LNDRHVDLVQ DGFDLVIRAT DKLAESSLVC RKIYSCKAYT VASHDYLKRF GLPQSPEQLS EHQCICYSNL KQANKWIYSH SNGTDNQVEV KAKLLCNSAS MELAMVLAGH GICRLPAFVM EKELQDNKLA ILFNDYITPT IDVYAIYPSR KHLSPKVRCF IDLLVDKMPR SLL
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