Gene CPS_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1006 
Symbol 
ID3520444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1025932 
End bp1026687 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content39% 
IMG OID637283471 
Producthypothetical protein 
Protein accessionYP_267755 
Protein GI71279981 
COG category[R] General function prediction only 
COG ID[COG0220] Predicted S-adenosylmethionine-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.894673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTA ATACGACAAC GAGTATAAAT ACTATTGATA CTCAAACATC ATTGGGTGAT 
TCTAAGGCGA TTATTAGTAA TCAAGAAGGT ATTCACGAAA AGCTTGATGA AGTGGTGAAA
AGACACCTAA CTCATGCTTC CCAAAAGCCT TATCAAGCAC ATACTAAAGA AGCCTTTGCA
CAAATGGATG CATTGGTGAA TGCCTTTCTA GTGGTAAATC CTGAGGGAGA GATTATCTTG
GATGCGTGTT GTGGTGTTGG TCAAAGTACA CGTATTTTAG CCAAGCAAAA CCCACAAGCG
TTAGTGATTG GTGTGGATAA GTCAGATCAT AGAATTAATC GTAATGTTGA AGGTTTCGAT
GTTGATGATG GTTTTAGTGC CGAAAACTAT CATTTAGTGC GCGCAGACTT GAATGATTTT
TATCGATTAG TTAAAGCTGC TGATTGGCCA GTATCAAAAC ACTACATTTT ATATCCTAAT
CCTTGGCCAA AGTCTAAACA CTTACAACGC CGTTGGCATG GTAGTGCCGT TTTCCCACAA
ATGACCAGTA TCGGTCAGCA GCTTATTTTG CGTAGCAATT GGCGTATTTA TTTAGCTGAA
TTTCAACAAG CGGCTAAATT GGTCGATTTA CGCGGTCAAA TTGACGCTTT GCCAGTGGTT
GACTCTTCGT TAGCATTAAC GCCATTCGAA GCAAAATATC AAGCCAGCGA TCAAATTTGT
TGGCAATTAA TATTAGGACG TGTTGAACTT TATTGA
 
Protein sequence
MAANTTTSIN TIDTQTSLGD SKAIISNQEG IHEKLDEVVK RHLTHASQKP YQAHTKEAFA 
QMDALVNAFL VVNPEGEIIL DACCGVGQST RILAKQNPQA LVIGVDKSDH RINRNVEGFD
VDDGFSAENY HLVRADLNDF YRLVKAADWP VSKHYILYPN PWPKSKHLQR RWHGSAVFPQ
MTSIGQQLIL RSNWRIYLAE FQQAAKLVDL RGQIDALPVV DSSLALTPFE AKYQASDQIC
WQLILGRVEL Y