| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0985 |
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| Symbol | |
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| ID | 3520651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 996536 |
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| End bp | 998350 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283450 |
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| Product | putative alpha amylase |
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| Protein accession | YP_267734 |
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| Protein GI | 71280187 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTA TGAGTAAATG TTCGGTATTA ACAGCTATAA GCTTGGCGTG TATTACATCT
CAAGTAAGCC AAGCAGGAGG CGTGGAGCTA ACAGAAAAGT TAACGGCTAA GGCGGCAACG
TTAGCACCTT ATCAGCAACG TGATTTTCAA GAAGAGGTCT TTTACTTTGT TTTACCTGAC
CGTTTTTACA ATGCCGACAC CAGTAATGAT TTAGGCGCTG CTGAAAATGA TAAAAAGCGT
GCTGTGTCTC GCGGTGGGTT AGATAAAACG CATAAAGGCA TGTATCACGG TGGTGATTTA
GCTGGTTTGA CTGAAAAATT ACCTTACCTA GATAATATGG GGGTAAGTGC CATTTGGTTA
ACGCCGATAC TTCGTAATCG CGCTATGCAA GCGGGAACCT CTGGTTATCA TGGATATTGG
ATATTGGATT TCACTGAAAT TGACCCGCAC CTGGGCAGTA ACGCCGAACT AAAAAACTTT
ATAGACCAAG CGCACAAACG TAATATAAAA GTATTTTTTG ATATTATCAC TAACCATACA
GCTGACGTGA TCAAGACCAA AGAATGCCAC GGCGAAGACG GTTTAGGTTG GATAGTTGAT
GTAAGTAAAG GTAATGATTG TCCATTTATT TCTATGGCGC AACTTGCTCA AGGCAAGTAT
TACACCCCAT TAATTCCTAA AGGTGATGAA ACACTAAAAT ATCCAGCATG GCTTAATGAT
ATGGATGTTT ATCACAACCA AGGTGATTCA TTCTGGCGAG GCGAAAGCTC AGTGCGAGGT
GACTTTGCTG GCCTTGATGA TTTATATACC CAAAAATCTA GTGTTGTTAA TGGCATGATT
GCTATTTACC AAGATATTAT TGATGAGTTT AAGCCTGATG GCTTTCGTAT TGATACCGTT
AAACATGTCA ACATAGAGTT TTGGCAGCAA TTCTCACCAG CCCTAATGCA ACATGCTAAA
GCACAAGGTA TTGATAACTT TTTCATGTTT GGTGAAGTTT ATAGTTTTGA ACCTGAATTA
TTAAGTCGCT TTACTACAGA AGCTAAAATT CCTTCAGTAT TAGACTTTGC TTTTCAAGGT
GCGATGACGA AAGCCTTGGT TGAACAGCAA GGTACTGATG TATTGGCGCA ATTATTCGCT
AAAGACCATT TTTATAATAC TGAGCATAAA TATATTCGCA ACACCAATGC TAATCAATTA
GTTAATTTTA CCGGTAATCA TGACATGGGT CGCTTTGCTT TTTCACTGAA GCAAAGTTCT
CATAATTATA GTGAACAAGC ACAAATTCAA CGTAACTTAT TGGCACATGC GATGATGTTC
TTTAGTCGCG GTGTACCGGT AATTTATTAT GGAGATGAGC AAGGTTTTGT CGGTGATGGT
GGTGATCAAG CTTCACGCCA AGATATGATG CCTTCATTTG TTGACAGTTA TAATGATGAT
GATTTACTGG CTACAACTAA AAGCACAGCC GACGATAATT TTGATACTAA CCATCTTTTT
TATCAAAGCT TTGCTAAGTA CGCTCAGTTA TATCAGCAAT ACCCAGCGTT ACGTTTTGGT
GAGCAGGCGG TGGTATATTC TCAAAATGAA GCCGGTATTT TTGCTATTAC ACGTCAAACG
AAAGCGACGA ATAACACTAA TGCACAAAGT TTATTGGTTG TGTTTAATAC GGCAATAAAT
GCGCAAAGCT TGAATCTAGT GTCAGAGAAA ATAGGCGTTA AACAAGCAGA AACTACATTG
CTTTATCGTT CAGTGGAGTC TGGAAAGGCT GATGAGATAG CACCCCTGAG CTTTGCTATT
TATCAATTGA AGTAG
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| Protein sequence | MNFMSKCSVL TAISLACITS QVSQAGGVEL TEKLTAKAAT LAPYQQRDFQ EEVFYFVLPD
RFYNADTSND LGAAENDKKR AVSRGGLDKT HKGMYHGGDL AGLTEKLPYL DNMGVSAIWL
TPILRNRAMQ AGTSGYHGYW ILDFTEIDPH LGSNAELKNF IDQAHKRNIK VFFDIITNHT
ADVIKTKECH GEDGLGWIVD VSKGNDCPFI SMAQLAQGKY YTPLIPKGDE TLKYPAWLND
MDVYHNQGDS FWRGESSVRG DFAGLDDLYT QKSSVVNGMI AIYQDIIDEF KPDGFRIDTV
KHVNIEFWQQ FSPALMQHAK AQGIDNFFMF GEVYSFEPEL LSRFTTEAKI PSVLDFAFQG
AMTKALVEQQ GTDVLAQLFA KDHFYNTEHK YIRNTNANQL VNFTGNHDMG RFAFSLKQSS
HNYSEQAQIQ RNLLAHAMMF FSRGVPVIYY GDEQGFVGDG GDQASRQDMM PSFVDSYNDD
DLLATTKSTA DDNFDTNHLF YQSFAKYAQL YQQYPALRFG EQAVVYSQNE AGIFAITRQT
KATNNTNAQS LLVVFNTAIN AQSLNLVSEK IGVKQAETTL LYRSVESGKA DEIAPLSFAI
YQLK
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