Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0975 |
Symbol | |
ID | 3519642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 979918 |
End bp | 981414 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637283440 |
Product | hypothetical protein |
Protein accession | YP_267724 |
Protein GI | 71278158 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.798408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGA CGAGTAATCA AAATCAACAC AATCAACATA AACCACGCTT GAGTTTTTGG CAAATTTGGA ATGTTAGCTT TGGTTTTCTG GGCGTACAAT TTGGCTTTGC CTTACAAAAC GCTAATGCCA GTAGAATACT CTCCGATTTA GGCGCTGATT TACACTCTTT ATCACTCTTT TGGTTAGTTG CTCCCATCAT GGGTTTGATT ATTCAACCTA TTGTTGGCTC AGCTTCAGAT AAAACTTGGA ATCGCTTAGG GCGTCGTAAT CCTTATATTT TAGCTGGCGG TGTGGCCGCA GCGATTGGTA TGCTATTAAT GCCAAACTCA GCAACGTTAG CGAGTTTTAT CACTCCACTA TTTTTTGGCG CTATGATGTT GGCGTTAATG GACGCTTCTT TTAACTTAGC TTTCCAACCA TTTCGTGCCT TAGTATCTGA CATGGTACCT GCTGAGCAAC GAAACGTCGG TTACTCTATT CAATCTTTTT TAATTAATAT TGGTGCTGTT TTTGGCTCAA TTTTACCGTT TGTTTTAACC AACGTCATTG GCTTAGAAAA TACCGCAAGT AGTGGTCAGG TTGCCCCCTC AGTAATATGG GCTTTCTATA TTGGCGCAAC GGTTATGCTT GGTTCGGTAT TATGGACAGT ATTACGTACT AAAGAATATC AGCCAGGGAC TAATGGTTTA GCTGAGCTAG AAGAACAAAA AGAATCGCAA TCCCTTAGCG AGAAATTAGT TGAATTTTTC TCACTAGTAA AAACTATGCC GAAAACAATG AAGCAACTTG CGCTAGTGCA ATTCTTCTCA TGGTTTGCAC TCTTTATTAT GTGGGTATAC ACCATGCCAG CCATTGCACA GCATATCTGG GGCATTGATG CAAAATGGTT TGATCCAACA TATCTAGAGT CCGTAGGCAC CATACCAGCC CATATCGCTA AAGCTAAAGG TACGGCTGGT GATTGGGTGG GCATTATCTT CGCTGCTTAT TCATTATTTG CCGCTATTGC TTCAATTTTC ATGGCGAAAG TAGCCAATAA AATTGGTCGT AAATTAACTT ACTCACTTTC TTTATTAGCT GGCGGTATCG GCTATTTAAG TATCATGCTA GTACATAACC CTGAACTAAC TCTGGTTAAT TTAGGTATCA CCCAAATTTC AGTACCTCAA GGTGCGGTGT CGTTATTTTT ACCTATGATT GGCGTTGGTA TTGCTTGGGC TGCAATATTA GCAATGCCCT ACGCTATTTT GGCAGGGTCA TTACCCGTGA AACAAACTGG CGTTTATATG GGAATATTTA ATTTCACCAT TGCTGCTCCA CAGATTGTTT CTGGAATTTT TGCGGGTTGG ATTTTAACGG CAGTGTTCGA TAATCAAGCC ATTTATATTA TTATGCTGGC AGGTATTTCA ATGCTATTAG GAGCGATTTC AGTGTACTTT GTTAAAGAAG ATACTGAACA AGCAATTGTG ACTAAGCAAG TTAACCTCAC TTCTTAA
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Protein sequence | MSETSNQNQH NQHKPRLSFW QIWNVSFGFL GVQFGFALQN ANASRILSDL GADLHSLSLF WLVAPIMGLI IQPIVGSASD KTWNRLGRRN PYILAGGVAA AIGMLLMPNS ATLASFITPL FFGAMMLALM DASFNLAFQP FRALVSDMVP AEQRNVGYSI QSFLINIGAV FGSILPFVLT NVIGLENTAS SGQVAPSVIW AFYIGATVML GSVLWTVLRT KEYQPGTNGL AELEEQKESQ SLSEKLVEFF SLVKTMPKTM KQLALVQFFS WFALFIMWVY TMPAIAQHIW GIDAKWFDPT YLESVGTIPA HIAKAKGTAG DWVGIIFAAY SLFAAIASIF MAKVANKIGR KLTYSLSLLA GGIGYLSIML VHNPELTLVN LGITQISVPQ GAVSLFLPMI GVGIAWAAIL AMPYAILAGS LPVKQTGVYM GIFNFTIAAP QIVSGIFAGW ILTAVFDNQA IYIIMLAGIS MLLGAISVYF VKEDTEQAIV TKQVNLTS
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