Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0934 |
Symbol | |
ID | 3519011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 938739 |
End bp | 939635 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637283399 |
Product | LysR family transcriptional regulator |
Protein accession | YP_267683 |
Protein GI | 71278365 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.886955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTT CTTTTGAACA GCTAAAAAGT ATGGTTGTTT TTGCCCAAGT GATTGAGCAG GGTACGCTCA GTGGTGCTGC TAAACATATT GGACTCTCTC GTGCGGTGGT GAGTTACCAT ATAAAAAAAC TTGAAGCTCA ATTAGGTATA AAACTACTGA ATCGCTCTAC TCGCACTATT TCAGCGACTG AAGCAGGGCT TGAGTATTAT CAATATTGCC GCGTTATCGC TGAGCAAGCA TCAGCGGCTA ATCGACAGAT TGAAAATCTT AAACATGAAC CGGTCGGTTT ATTAAAGATT ACCTGTCCAG TTAATGTTGG TTTGCAAACT ATTGTTCCTG CACTTAATGA GTTTCGTACC ATTTACCCTA AAATTGAACT TGATGTCATG CTTACGGATG AAGTGGTAAA TATTATCAAA GAAGGCATAG ACCTAGCTAT TCGTGGTGCT CCTTTAGCCG ATTCAGGCCT ACAAGCAGCA AAATTATCAA CACTCAGCAC TTGTCTTTGT GGCTCACCCG CATATTTTGA AAAGTTTGGT TTTCCTAAAC ACCCAACGGA GCTGAATAAA CATCAATGGG TGCTGTATAA GTTAACTGCG GGTTCGCTCG AGCTGACAAA AGGTAGTCGT TCTTTTAGCA TTGAAATGAA AGGCACAATC AGCACAAATA ATGCGGCAGC AAGAACCGCT TTTGTTGAAG GTGGCCACGG TCTAGGTCGT ATTCCTGTTT ATGATGCAAA ACCTAGAATC AAAGCAGGGC AGTTGCTTTC GGTACTTGAT GATTACGATA TGAGGGATAT TCATGTCTAT GGGGTATTTC CTCCAGGGAA TGCCGAGTCG AAGAAATTGC GGTTGTTGAT AGATTTTTTA AAAGCATACT TCTTAAAGAA TCAGTAA
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Protein sequence | MNISFEQLKS MVVFAQVIEQ GTLSGAAKHI GLSRAVVSYH IKKLEAQLGI KLLNRSTRTI SATEAGLEYY QYCRVIAEQA SAANRQIENL KHEPVGLLKI TCPVNVGLQT IVPALNEFRT IYPKIELDVM LTDEVVNIIK EGIDLAIRGA PLADSGLQAA KLSTLSTCLC GSPAYFEKFG FPKHPTELNK HQWVLYKLTA GSLELTKGSR SFSIEMKGTI STNNAAARTA FVEGGHGLGR IPVYDAKPRI KAGQLLSVLD DYDMRDIHVY GVFPPGNAES KKLRLLIDFL KAYFLKNQ
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