| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0922 |
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| Symbol | |
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| ID | 3520570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 926822 |
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| End bp | 928186 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283387 |
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| Product | major facilitator family transporter |
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| Protein accession | YP_267671 |
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| Protein GI | 71280107 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTTT CAGGTTTAAA CCGTATTGAG AAAAAAGCCG CCTTTTCCTT AGCCAGTGTC
TTTGGCGTGC GCATGTTAGG CTTGTTCATG ATCTTACCCG TATTCGCCAT TTATGGTGAA
CAACTAACGG GTTATAGTCC CATTTGGTTA GGATTAGCCA TTGGTGCCTA TGGATTAACG
CAAGCTTTAT TGCAAATCCC TATGGGCATT CTTTCGGATA AATATGGCAG GAAACCGGTA
ATTCTTGCCG GCTTAGTGGT CTTTCTCATC GGTAGTATTG TTGCGGCAAT GTCTGACACT
ATTTATGGTG TTGTGCTCGG TCGAGCAATT CAGGGGATGG GTGCTATTGC TAGTGCAATA
CTTGCTTTAG CTGCTGATTT AAGTCGAGAA GAACAGCGAC CTAAAGTCAT GGCAACCATT
GGTATGTTTA TCGGTTTATC ATTTACCTTT GCTATGATTT TAGGACCAAT AGTTGCTGAT
GCCTTTGGTT TAAGTGGCTT ATTTTGGTTT ACAGGGCTAT TGACTACCTT TGCCATGGCG
ATGATTCAAT TTATGGTGCC AAACTCAGTG AATAAAGCAC CGCGTGGCGA TAACGTTGCC
TTGCCTGAGC AAATTACTCG TTTGATTCGC CACCCACAAT TATCCCGTTT AAATTGGGGC
GTTTTCATTC TACATATGAC ACTGACGGCC TGTTTTATTA CTTTGCCTAA ACAGTTTGTC
GCTAGTGGTT TATCTCTTGA AGACCATTGG CAAATTTACT TACCTACTTT ATTAGGTTCT
TTCTTTTTAA TGGTGCCATT TATGATTTTT GCCATTAAAA AACAGAAAGA AAAACCCATG
TTCAGTGCGG CTATTACACT ATTGGCCATA GCTTTATTTT TACTTTGGTT ATTACCTAGT
GGTTTCTGGA GCCTAGTGCT GTCAGTTGTA CTATTTTTCA CAGCTTTTAA CTATTTAGAG
GCAACCATGC CGTCAATCTT ATCACGTATA GCACCTGCTG GCGTTAAAGG TAGTGCTATG
GGGATATATT CAAGCAGCCA GTTTTTAGGT GCTTTTGTTG GTGGTATTCT GGGTGGTTTT
ATAGCGAGCC AATATGGCGA GCAAACCATC TTCTTAGTGA TGACAATAGT AACGGTTATC
TGGTTGGGAT TAAGCTTTGG TATGCAGTCA TTGAAAAAAT CAAAAAGTTT TAGTTTTGCC
ACCAATATTA CCTGTGAAGA AGAAGCTGAT AAAATGGCCG ACCAATTAAT CAATATGCCC
GGTGTTATCG AAGCAACCCT AGTGCACACC GAGGCAGTCG CTTATTTAAA GGTTGATGTT
AAAACGGTGG ATTTACTCGC CATTAAAGCG TTACTTCAAA GTTAG
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| Protein sequence | MSVSGLNRIE KKAAFSLASV FGVRMLGLFM ILPVFAIYGE QLTGYSPIWL GLAIGAYGLT
QALLQIPMGI LSDKYGRKPV ILAGLVVFLI GSIVAAMSDT IYGVVLGRAI QGMGAIASAI
LALAADLSRE EQRPKVMATI GMFIGLSFTF AMILGPIVAD AFGLSGLFWF TGLLTTFAMA
MIQFMVPNSV NKAPRGDNVA LPEQITRLIR HPQLSRLNWG VFILHMTLTA CFITLPKQFV
ASGLSLEDHW QIYLPTLLGS FFLMVPFMIF AIKKQKEKPM FSAAITLLAI ALFLLWLLPS
GFWSLVLSVV LFFTAFNYLE ATMPSILSRI APAGVKGSAM GIYSSSQFLG AFVGGILGGF
IASQYGEQTI FLVMTIVTVI WLGLSFGMQS LKKSKSFSFA TNITCEEEAD KMADQLINMP
GVIEATLVHT EAVAYLKVDV KTVDLLAIKA LLQS
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