Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0881 |
Symbol | |
ID | 3522191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 890002 |
End bp | 891369 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637283346 |
Product | zona occludens toxin-like protein |
Protein accession | YP_267630 |
Protein GI | 71281719 |
COG category | [R] General function prediction only |
COG ID | [COG4128] Zonula occludens toxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0128926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACTA AAGTTTTTCA TGGTCCCCCA GGCTCTTACA AATCATCTAC GGCCATGTGG TTTGAAATTG TTCCTGCTTT ACGTCTTGGT CGTGTAGTTG TTACTAATTT GCAGGGCATC AAAACGCTTG AAGAGATACA GCGCGAGTTA AAAGAGGTTT TTCCTAGTAC GGCTAGATTG TTACGAATAA GTATTGGTAA TGATACGGGT ATGTTGTTGA TGCGTAATTT CTTTCATTGG TTGCCGATTG GCGCGCTTAT CTTTCTGGAT GAAATACAAG ATATTTACCC AAATGATAAG TCTTTTAAGG CTTCTGATTA TGACTATAAG ACTGAGGGCG CTTTTGATGA TTTATTGCCT CAAGAGTTTT CGGAAATTTA TCATGAAGAA CAACGCAAAA TTAAGTCCAA TGTAAACATT GAAGATTATC AGGATGATAT TGGTGAATCT CTTTTTGATG AGCGAAATTA TTTACGATAC CCAAGAACGC TGCGTGAATG CTTTATGCGT CATAGGCATT ACAACTGGGA TATCTTATTG GCCACGCCTG ATATTAAGGA AATATCATCG TTTATCCGCT CTGTTTGTGA GGTTGCTTAT GCTCACTCGT CAAAAGATGC GATCCCAATT CCCTACTACA AAAGACGTCC TAGAATTCTA GAACATTTAC CCAAAACTAA TGGAATTTCT GTTGGTAAAA ACGATATTGT CACGTTCAAA AAGGTGCCGC TCGATGTTTT CAAACTTTAT AAGTCCACAG CAACAGGAAA ATCTACTAAA TCGGGCGCTG GTCAGTCGCC TATTACTCCT AGTGTTATTG TTGGCTTCGC CTTTGTGGTT GCCTATCTTG TGTATATGGT TTTCTTTTTC TTCGACGATG AAAGCATTGA AGTTGATGAA CCGTTGGCGA ATAGTTTACC TAATGCGATT TCACAAAGTC CGAAAGCTTC AGCGGCTGCT GTTCAAGTTG CTAATGCTTC CGTTCGTACT GCTCAAAAAA GTGATGGGGA GATTAATCCT TTTTCTTTTC GTCGTGCTAG TGTTTCGACT GTTACTGCGC CTAATAATTT TGTAGCGCTG CCGTTCGGTG CGACCAAGAT GTATATCAAT GCGGTTAATA CGGTTTATTT TAATAAGCAT CGTGTTACTC GTGATTATGT CTTCACTGCT TACATTAATG ATGAAGTATT AAATGTTGGC TCTGAATCGT TAATAGCGAT GGGTTATAAG ATTTTCTTTA GCTCAGACTG TTTAGTTGAA TTAAGGTCAA ATAATCACAG TAACTATGTG TATTGTGAGC CAACTAAACC GAGTGAGCCT TTTCAAGAAG CGAGGGGCAA TAGCCCTATT CAGTTGTCAT TACTCTAA
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Protein sequence | MATKVFHGPP GSYKSSTAMW FEIVPALRLG RVVVTNLQGI KTLEEIQREL KEVFPSTARL LRISIGNDTG MLLMRNFFHW LPIGALIFLD EIQDIYPNDK SFKASDYDYK TEGAFDDLLP QEFSEIYHEE QRKIKSNVNI EDYQDDIGES LFDERNYLRY PRTLRECFMR HRHYNWDILL ATPDIKEISS FIRSVCEVAY AHSSKDAIPI PYYKRRPRIL EHLPKTNGIS VGKNDIVTFK KVPLDVFKLY KSTATGKSTK SGAGQSPITP SVIVGFAFVV AYLVYMVFFF FDDESIEVDE PLANSLPNAI SQSPKASAAA VQVANASVRT AQKSDGEINP FSFRRASVST VTAPNNFVAL PFGATKMYIN AVNTVYFNKH RVTRDYVFTA YINDEVLNVG SESLIAMGYK IFFSSDCLVE LRSNNHSNYV YCEPTKPSEP FQEARGNSPI QLSLL
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