Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0775 |
Symbol | |
ID | 3519371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 792878 |
End bp | 793609 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637283240 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_267524 |
Protein GI | 71279130 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCAC TTATCACCTT AAAAAATATT AGCAAAAAAT TCTTAACTGA AGAGATAGAA ACGCGGGCTT TAAATACTAT TAACCTAGAG ATTAATAAGG GGGAATACCT GTCACTCAGT GGTCAGTCAG GTTGTGGTAA ATCAACCTTA CTCTCTTTAC TAGGATTATT AGATGCACCT AGTTCAGGAC ATTATCATTT AGCAGGTAGT GATGTTTCAG CTTTAACACG GGATCAACGA GCAAAAATAC GCAGTGAACA AATAGGGTTT GTTTTTCAAT CGTTTAATTT GATTTCAGAT CTCACGGTAT TTGAAAATGT TATGTTACCG TTGACGTATC AAACAGGAAA GTCTAAAAAA GCCATTGAAG CTAAAGTGAA TGAAGTATTA GCGAAAGTAG AAATGGGACA TCGTAAAAAT CATTACCCTT CACAATTATC TGGCGGACAA CAACAGCGTG TTGCCGTTGC TAGAGCCTTA GTTAATGACC CTGCAATTAT TCTTGCCGAT GAACCAACAG GTAACTTAGA TTCAAAAAAT GCCGAGGCAG TTTTACAGCT ATTCGATCAA CTTCATCATG ATGGCGCAAC TATCTGCATG GTGACCCATG ATCCCTCGTC AGCGAAGAGA GCGAGTAGGT GTTTAGAAAT GTTTGATGGG CAACTGATCA AAGACAATAT CAATCATGAT CGTCAAGTAA CGCTTAAACC AGTTGAATTG GCTGCGGGCT AA
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Protein sequence | MTALITLKNI SKKFLTEEIE TRALNTINLE INKGEYLSLS GQSGCGKSTL LSLLGLLDAP SSGHYHLAGS DVSALTRDQR AKIRSEQIGF VFQSFNLISD LTVFENVMLP LTYQTGKSKK AIEAKVNEVL AKVEMGHRKN HYPSQLSGGQ QQRVAVARAL VNDPAIILAD EPTGNLDSKN AEAVLQLFDQ LHHDGATICM VTHDPSSAKR ASRCLEMFDG QLIKDNINHD RQVTLKPVEL AAG
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