Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0478 |
Symbol | |
ID | 3518527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 479980 |
End bp | 480669 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637282943 |
Product | hypothetical protein |
Protein accession | YP_267236 |
Protein GI | 71278855 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA CACTAGTAAA TATCGCACTC ACTTCCGCTT TAATAGCAGG TTCACTTGTA GCATCTTCAG CATTTGCTGT TGAAGGTTTG TCAGCAAACG TTGGAGCAAC TAGCAACTAT TTATGGCGTG GCGTAACACA AACAGATGAC GCTGCCGCTA TTTCTGGTGG TATTGACTAT GCACACGAAT CAGGATTCTA TGCTGGTACT TGGGCTTCTA ATGTAGACTT TGGTGATGAT GCTAGTGCTG AACTAGATTT TTACTTAGGA TTTGGTGGTG AGTTAGGTCA AGGTTTTGGT TACGATGTTG GTTACATTTA TTATGCTTAC CCTGATTCAG CTCAAACTGA CAGTACTAAT GAATATGATT TTGGTGAAGT CTACGGCTCA TTAAGCTACT CATACTTTTC AGTTTCAGCC AACTATGGTG TAAATAATGA TGATGGTGCT GAATGGGCTG ATAGCGCACT ATATATTTCT GCTGACGCGG AAATTGAAGT TGCTGAAGGC TTAACTTTAG CGCTACACAT AGGTGATTAT TCTTTCGATG ATGACTACAA AAGTGATGAT TATAGCGATT ATGGTGTAAG TTTAAGTAAA GGTGGCTTCA CCTTCGCGGT ATCAGATACT GATATGGATA ACGATGATAT GAAATTTACA GTTTCTTATT CTATTGATAT CGATTTATAG
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Protein sequence | MKKTLVNIAL TSALIAGSLV ASSAFAVEGL SANVGATSNY LWRGVTQTDD AAAISGGIDY AHESGFYAGT WASNVDFGDD ASAELDFYLG FGGELGQGFG YDVGYIYYAY PDSAQTDSTN EYDFGEVYGS LSYSYFSVSA NYGVNNDDGA EWADSALYIS ADAEIEVAEG LTLALHIGDY SFDDDYKSDD YSDYGVSLSK GGFTFAVSDT DMDNDDMKFT VSYSIDIDL
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