Gene CPS_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0335 
Symbol 
ID3520488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp347503 
End bp348135 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content39% 
IMG OID637282800 
ProductDNA-binding transcriptional repressor FabR 
Protein accessionYP_267101 
Protein GI71280025 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGTG TAAGAGCACA ACAAAAAGAA AAGACCCGTC GTCAAATTAT TAATGCAGCT 
CTAAATCAAC TGAGTGCGGA ACGTAGTTTC TCAAACTTAA GTTTACGCGA AGTTGCAAAA 
GAAGCGGGTT TAGCCCCGAC ATCTTTTTAT CGCCATTTTT CTGATATGGA TGAATTAGGT 
TTAACTTTAG TGGATGAAGC AGGTTTAACA CTGAGACAGC TGATGCGACA AGCAAGGCAG 
CGTATCGCTA AAGGTGGATC TGTTATTCAA ATATCAGTAC AGACCTTTAT GGAATTAATT 
GAAAGTAATG GTAATATTTT CAGACTATTA TTACGTGAAC GTTCAGGCAC CTCCGCTGCT 
TTTCGTGCTG CTGTAATTCG TGAAATTCGT TATTTTACAA TGGAGCTTTG TGATTACCTT 
CAAAAAGCGA ATCAGCTTGA AGCTGATGTT GCCTATATGC AGGCTAATGC TGCGGTAACC 
ATTGTTTTTA GTGCTGGTTC GGATGCACTT GATATAGAAG ATAAAGCGGA ACGTGATCAA 
TTAGCTCAAC AAACAATTCA GCAATTACGC TTTATTGCCC GTGGTGCTCT TGAACTAAGT 
GATCGTCGTA AAATTTCAAG AAAATCTCGT TAG
 
Protein sequence
MSGVRAQQKE KTRRQIINAA LNQLSAERSF SNLSLREVAK EAGLAPTSFY RHFSDMDELG 
LTLVDEAGLT LRQLMRQARQ RIAKGGSVIQ ISVQTFMELI ESNGNIFRLL LRERSGTSAA 
FRAAVIREIR YFTMELCDYL QKANQLEADV AYMQANAAVT IVFSAGSDAL DIEDKAERDQ 
LAQQTIQQLR FIARGALELS DRRKISRKSR