Gene CPS_0243 details

Gene Information

• Locus tag: CPS_0243
• ID: 3520490
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 248046
• End bp: 248615
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637282709
• Product: putative RNA polymerase sigma-70 factor FecI
• Protein accession: YP_267010
• Protein GI: 71280027
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAAAG AAAGTACATT ACACATCAGT TTTATGGCTG TAAGGCAGAC AATGCGCAGA 
GTGATCTCGC GCATTGTGCC GCCGCGAGAA GTGGAAGATA TCGTACAAGA AACATATGTA 
CGTATATGCC AAGTTGAGAA CAAAGAAGCA ATCAAGCAAC CTAGATCTTT TTTGTTAAAA 
ACGGCAAAAA ATTTAGCCAT AGATCACCTT AAACGAGCAG ATATTAGGCT CGTAGACACT 
GTCGATAATA TGGCTGAATT TGAACACTTA GTCAGTGCAG ATGATGCAAT ATATCAGCAA 
GTGGCAACGG ATAAAGAGTT TGCTCAATTC TGTGAAGCAA TAAGACAATT ACCAATACAG 
TGCCGTAAAG CTTTTGTATT AAAAAAAGTG TATGGCTACT CGCAAAAAGA AATCGCGAAA 
AAACTGGCAA TCAGTGAAAG CACAGTTGAA AAACATATTG GCCTCGGCGT TAAACGCTGT 
ACCTATTTTA TGATGCAGTT AACTAAAGAA GAAAGAACGG AAACAATGAA AAATAGTAAA 
AAAACACATC AAGTAAGAAG GGATCTCTGA 

 

Protein sequence

MIKESTLHIS FMAVRQTMRR VISRIVPPRE VEDIVQETYV RICQVENKEA IKQPRSFLLK 
TAKNLAIDHL KRADIRLVDT VDNMAEFEHL VSADDAIYQQ VATDKEFAQF CEAIRQLPIQ 
CRKAFVLKKV YGYSQKEIAK KLAISESTVE KHIGLGVKRC TYFMMQLTKE ERTETMKNSK 
KTHQVRRDL