| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0068 |
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| Symbol | |
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| ID | 3520119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 68317 |
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| End bp | 71787 |
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| Gene Length | 3471 bp |
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| Protein Length | 1156 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637282535 |
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| Product | sensory box sensor histidine kinase/response regulator |
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| Protein accession | YP_266836 |
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| Protein GI | 71279659 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCCTA ATTGGCAATT AGTGCTGTTA AGTTTGGCTT ATATTGGCCT ATTATTTTTA
ATTGCTTTTT TAGGTGACCG ATACCGACAC CAGTTGGCTA GAAAGGGACA GAGCATTATT
TATGCACTGA CCTTGGGGGT TTACTGTACC TCTTGGAGTT TTTTAGGAAC AACAGGACAA
GCATCGACCA GTTTACTGTC TCACTTACCT ATTTATTTAG GGCCCATTCT ATTATTCGTT
TTTGCTTGGC CATTTATCCA ACGTATTATT CGCGTTAGTT TAAAACTTCA TTTAACCTCA
ATTGCTGATC TATTGGCAGC TCGATTTGGT AAGTCTCACA ATCTCGCTAT CATGGTCACA
ATTGTTGCGC TCGTTGGCAC CATGCCTTAT ATCGCGCTGC AGCTTAAAGC TATGGTGTAT
TCATTTCAGC AACTTCAAAT AGACCAAAGC TTAAATAGCT GGCACATCGG TCTAGTTGTT
AGTTTAGTTC TAGCTATGTT TACCGTTTTA TTTGGTATTA GACATATCGA TGTCACTGAG
CGACACCCAG GTGTGATGCT GGCCATTGCC TTTGAATCTT TAGTGAAGTT AGCGGCCTTT
TTAGCGGTAG GTATCTTCGT TTGTTTTGTC TTGTATGACT CGCCAGCAGA TATTTGGCAG
CAGGCCAATG CTGATGAATT ATTAGAACAG CAATTAACCA TAGACAATGT AACGTCAATG
TTTGCCATGT TGGTGATTGT TATGGCGGCT TTCTTGTCTT TGCCAAGGCA ATTCCAAGTC
ATGGTTGTTG AGCTTAAGGA TCAAAGAGAT ACTTGGTTAA GTCGTCGAGT TTTCCCTATA
TATATTTTAA TTTTTGCCTT TTTTGCTGTG CCGTTGGGGT TAGCTGGTCA AATGCTTCTT
GGTAATACGG TGCCTTCTGA TACCTACGTA CTCTTTCTTC CTGACGTTAC CCAACAAACA
TGGTTGACCT TATTTGCCTT TTTAGGTGCA GTCTCGGCAG CAAGTTCTAT GGTCATTATC
TCTTCGATTG CTTTGAGTAC CATGTTGAGT AATGAAATTG TTTTCCCTCT GCTTTATCGT
CGTCAAAAAG TAGCACAGAC TGACTATGAT AACTTTCGCA AGCGATTGTT AAATATTAGA
AAATTATTGG CTTTGTTTGT TATTTTATTA GGTTATGGTG TTTTCATCAT GGCTTCACCA
GATACACTCT CTTCATTAGG GGAAGTGGCC TTTGGCGCTT TCGCACAATT AACACCAGCC
CTTATTGCTG CTTTTTATTG GCGTCGTGCT AGTTTAATGG GCGTTTATGC AGGGATTTTA
GTGGGTTTTA TTTTGTGGCT TACTCTTAAC TTTTTACCTC AGTTTGGTCT ATATGCTTCG
CCTTTTGCCG AAGGCTTTTT GCCTGTTAAA ACCACGGCGA CCTTATTTAG TTTAGGCGCT
AACATTATTG TAATGTGGGC TTTGTCTCAA ATCAGCAGAC AAAGTGTACA AGAGCGAGTT
CAAGCATCAT TGTTTTTAGA GTGGCAGTCA CCTAAGTTAT TAAAAGTAGA GAAAAAAAGA
CAGCTTGATG TACAAGAATT AGAACTGTTA GCCTCGCGTT TCGTTGGTTT GGAAAAAGCA
CAAGCTAACT TTAATTCCTT TTTATCATCG CATGATAAAA AGGAGTTGGG CAATGTCATT
TATAATCAAC AATTGATCCA ACATACCGAA AATACCTTAG CTACGGTTAT GGGCTCATCT
TCGGCACGAC TAGTGCTTTC TTCCGCATTA GATGGTCGTG ATATTGCCCT AGAAGAGCTG
GCGGTACTTG TTGAAGATGC ATCTAGTCAA CAGCAAGAAT TTTCTCAACA TTTACTACAA
AGTGCCATTG AGAATGCGAG TGAGGGCATT TCGATTGTTG ATGATGAGTT ACGCTTAGTG
GCTTGGAATA AAAAATACTT AGACTTATTC GAATACCCCC CTGAATTAGT CTATATGGGC
AGCCCAATAT CCGCCCTTAT TCGTCATAAC GTGAAACGAG GTTTGTGCGG CTCTGGTGAT
ATAGAGTCAC AGGTAGAGCG TCGTTTAGAT TTTTTACGTA AAGGTAGCCC GCATAGCTCG
GAGCGGCAAC AAGTGAGTGG CCAAACTATT CGCATTGAAG GTAATCCGCT TCCTGGTGGC
GGTTTTGTCA TGCTATTTTC TGATATCACG GCATATCGAC AAGCAGAGCA AGTCCTCAAA
GAAGCAAACC TTGATCTTGA AACCCGTGTT TATGAACGTA CGCTAACGTT AGCTAAAACG
AATGAAGCGC TAGCGAAGGC ACATGAGAAA GCAGAACAAG CGCATTTGAA AAAGAGTCAA
TACCTAAACG CTTGTAGCCA TGACTTAATG CAGCCGCTTG AAGCTGCGAG ATTATTTACT
TCAGCATTGT CAGAACAAAA TAATTTAACG ACTGATCAGC AAAGGCAAGT CGAAAATATC
GATCGCTCTC TCAAAGCGGC GAACGATTTA TTAGCTGATT TAGCAGAAAT TGCGCGATTA
GAAAGTGGCA ACATCAAAGC TAATATTCAA GCATTCGCAC TGAATGAATT ATTTGAAGAT
TTAGCGCAAG AATTTTCGGC CCTTGCGATC GAGAAGTCAG TAGAGTTTCG TTTGGCGGTG
AGTAAAGTAT GGGTGAAGTC AGATAGGCAC TTATTAAGAC GTATCATTCA AAACCTTGTT
GGTAATGCCT TTAGGTATGC AAGTCCAGGC AAAGTATTAT TGGGTGCCCG AGTCTTTAAT
AATCAAGTAA TCATACAAAT TTTAGATAAT GGGCCGGGTA TTCCAGTTGA GAAGCAGGTC
CTGGTGTTCG AGCAATTTAC CCAACTTAAT ACCCCAAATA ATCATGCGGG CAGAGGATTA
GGTTTAGGGC TTAACATCAC ACAAAGTTTG GCGCAGTTAT TGGGACACAC GTTAAGCTTA
CAATCAAAAA CTATGCAAGG CTGTAAATTT TCTGTGCAAG TAGAACAAGC TGAGCCACTA
GTACAAAGTC GTATTGTTAA TAACCCAAGC TTTATCGTTG CTTTAAAAGA CATTACTGTA
TTATGTATTG ATAATGATCC AGATGTACTC AGTGGCATGG TTGAGCTACT TTCAGCATGG
CAATGTAATA TCCTCGCAGC AGATTCTAGA GAAACAGCCT TAGAAGAGTT TGCTAATCAC
AGTAATGAGA TTGATATATT ACTGGTAGAT TATCAATTGG GTTATCAAAC TGATGACCCA
CAAGGCAAAC AAGTTGATGG CTTAACCTTA ATTAGTGATT TACGTAGCCA ATGTCATCAT
TCGTTACCCG CAATATTAAT CACGGCGACA ACGGAGCCTG GGATTGAAGA TAAGGCTAGA
AGTTTAGATG TGGGATATAT GCGTAAATTA GTGAAACCAG CAGCGTTAAG GGCGATGATG
AGTGCCATGC TTGCTAAGAA ACTACAAGCA GATTACGTCG GTTATAGTTA G
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| Protein sequence | MFPNWQLVLL SLAYIGLLFL IAFLGDRYRH QLARKGQSII YALTLGVYCT SWSFLGTTGQ
ASTSLLSHLP IYLGPILLFV FAWPFIQRII RVSLKLHLTS IADLLAARFG KSHNLAIMVT
IVALVGTMPY IALQLKAMVY SFQQLQIDQS LNSWHIGLVV SLVLAMFTVL FGIRHIDVTE
RHPGVMLAIA FESLVKLAAF LAVGIFVCFV LYDSPADIWQ QANADELLEQ QLTIDNVTSM
FAMLVIVMAA FLSLPRQFQV MVVELKDQRD TWLSRRVFPI YILIFAFFAV PLGLAGQMLL
GNTVPSDTYV LFLPDVTQQT WLTLFAFLGA VSAASSMVII SSIALSTMLS NEIVFPLLYR
RQKVAQTDYD NFRKRLLNIR KLLALFVILL GYGVFIMASP DTLSSLGEVA FGAFAQLTPA
LIAAFYWRRA SLMGVYAGIL VGFILWLTLN FLPQFGLYAS PFAEGFLPVK TTATLFSLGA
NIIVMWALSQ ISRQSVQERV QASLFLEWQS PKLLKVEKKR QLDVQELELL ASRFVGLEKA
QANFNSFLSS HDKKELGNVI YNQQLIQHTE NTLATVMGSS SARLVLSSAL DGRDIALEEL
AVLVEDASSQ QQEFSQHLLQ SAIENASEGI SIVDDELRLV AWNKKYLDLF EYPPELVYMG
SPISALIRHN VKRGLCGSGD IESQVERRLD FLRKGSPHSS ERQQVSGQTI RIEGNPLPGG
GFVMLFSDIT AYRQAEQVLK EANLDLETRV YERTLTLAKT NEALAKAHEK AEQAHLKKSQ
YLNACSHDLM QPLEAARLFT SALSEQNNLT TDQQRQVENI DRSLKAANDL LADLAEIARL
ESGNIKANIQ AFALNELFED LAQEFSALAI EKSVEFRLAV SKVWVKSDRH LLRRIIQNLV
GNAFRYASPG KVLLGARVFN NQVIIQILDN GPGIPVEKQV LVFEQFTQLN TPNNHAGRGL
GLGLNITQSL AQLLGHTLSL QSKTMQGCKF SVQVEQAEPL VQSRIVNNPS FIVALKDITV
LCIDNDPDVL SGMVELLSAW QCNILAADSR ETALEEFANH SNEIDILLVD YQLGYQTDDP
QGKQVDGLTL ISDLRSQCHH SLPAILITAT TEPGIEDKAR SLDVGYMRKL VKPAALRAMM
SAMLAKKLQA DYVGYS
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