Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_A0003 |
Symbol | |
ID | 4206635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008263 |
Strand | - |
Start bp | 2714 |
End bp | 3745 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642567225 |
Product | N-acetylmuramoyl-L-alanine amidase domain-containing protein |
Protein accession | YP_699912 |
Protein GI | 110804005 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 465 |
Plasmid unclonability p-value | 0.0604159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAG CTATACGTGG TGGTCACAAT TTTTTATCAA AGGGAGCTTG TGGATTAATA GATGAAACTA CTGAAAATAG AAAGGTTTAT AAGTCTGTAA TTAAAAACTT AATTGAAAAT AATTTTGAAG TTTTAGATGT TACTCCAGGT GACTGTGATG TAAATACAGA CTTAAAATTT GGAGTAGAAA AAGCTAATAA TTTTAATGCA GATTTATTTA TTTCTATACA CTTTGATAAG TGTTATGAGA AATTTGATGG CCCTTTAGGT ACAGGAACTT GGGTTTGTGA AAAGGGAGGA AAAGCAGAAG TATATGCAAA AAATATAGTA GATACAGTTT CTGAAGGAAC TTCTCTAAAA AATAGGGGTG TTAAAACTAA CGCTAAACTT TATGAATTAA ATAAAACAAT AATGCCAGCA GTAATAGTTG AAGTTTGTTT TTGCGAATCT AAAGTTGATG TCGATATTTA TAAAGAAAAA GGCTCTGAAT TAATAGGTTA TTTAATAGCT AAAGGAATTT GTAAGTCTGT AAATAAAGAA ATTAGTGAAG ATTTACCTCA AAATAATAAA GAACAAGAAA ATATTAATTT ACAAGATAAT AAAACCTTTA AAACTAATGC AACTGCAAAA GTTGCTTTAG ATCCTAGGGA TAATCCTAGT AATAACTATA GAGATTTAGG AGAAATTTTT GCAAATGAAA GAATAAAAAT TCTGCCTGAA ATATGTGATT TAAAAACATT TTTACCTGCA ACTTATTGGA AGGATTCGGA AAATAAAGAA TCTACACCTA TATGGATTAA TTCCAAGCAA TCAGTATTAA AAATTGATAC TAATGCTACT GTAATTAATG TTTTAACTGA ATTAGATGCT AGATATGATC CTTCACCTAA TTCAAATAGA ATGGGCTATG TAAAAAATAG TGAAAGACTT TTTGTCCATA AAGTTGAAAA TAATTATGCA TTAGCTACTT ATTTAGCAGG AGAAGGATAT AAAACTGCAT GGTTTACATC TAAATATATA AAACTTGATT AA
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Protein sequence | MKIAIRGGHN FLSKGACGLI DETTENRKVY KSVIKNLIEN NFEVLDVTPG DCDVNTDLKF GVEKANNFNA DLFISIHFDK CYEKFDGPLG TGTWVCEKGG KAEVYAKNIV DTVSEGTSLK NRGVKTNAKL YELNKTIMPA VIVEVCFCES KVDVDIYKEK GSELIGYLIA KGICKSVNKE ISEDLPQNNK EQENINLQDN KTFKTNATAK VALDPRDNPS NNYRDLGEIF ANERIKILPE ICDLKTFLPA TYWKDSENKE STPIWINSKQ SVLKIDTNAT VINVLTELDA RYDPSPNSNR MGYVKNSERL FVHKVENNYA LATYLAGEGY KTAWFTSKYI KLD
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