Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2652 |
Symbol | |
ID | 4206467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2879268 |
End bp | 2880263 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642567200 |
Product | hypothetical protein |
Protein accession | YP_699887 |
Protein GI | 110802221 |
COG category | [S] Function unknown |
COG ID | [COG4241] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0372503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAA AGAATAAGAG TAAATCTATA GTTGAAGCTG GAATAATGTC AGCAATAACA TTTGTACTTA TGATGCTTAC TAGCTTACCA GGAATAGGTA CAATAATAAG CTTTGCTATT CCAATTCCTA TAGCTTTATT GTATTTAAAG TATAATCTTA AAACCTCTAT TTGTTCTATT GTTATTAGTG GAATTTTGAT TGGATTTTTC ATGGGGTCTA TATATGGAAT TCAATTAGCT ATAACAAATG GAATTATAGG TTTGGTTTTA GGAACCTGTG TTAGAAAGAA GTTTTCAGGA ATAAAATCAT TTATATATTT AATTGTAGCA AATACAATTG GTGTATTAAT AGAAATAGCA TTATTATTTT CAGTATTTAC AGGAATTACA TTTAATCAAT ATATAAATGA CTTAGTAAAT GTTTTTAATG AAGCTGCTAA AATAAGTGAA CAAATGATTG GAAGTTCACA AGCCAACACT CAAATGATAG AACTTATGAA GTCTATGGAT GCAAGTTTTA TAATTAATAT GATACCTATG GTATTAGTTG TGGTTATAAT AATGAGAGCA TTTTTAAGTT ATACCGTTGG AAAGTATATT ATTAATAAAT TAGGATTTAA ATTAAATAGC TTACCACCTT TTTCAAAGTG GTTTTTTAAC CCAATATTAA TTGCGGCAGT TGTATTAATA AATCTTTTTG TTATGCTTTT AGTAAGCAAG GGAGTAATAA GTAATAAGGG TATGTACATG CTTACACTAA ACTTATTATT TGCTATGCTT ATAATTCAAG GATTGGCTGT AGTCTCAAAT TTATTAAAGT ATAGATATAG ATTTAGCAAT TTTTTAATAG TTTTTATTAG TATATTAATG GTTACTTCAA TACCACAATT ATTTGGAATA TTGGGATTGG TTGATGTATT AATTGATATA AGAGGTGTAG ATCCAAATAG TTTAGGAAGT TACATTAAGG AGAAACTAAA AAGGAAATTG CAATAA
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Protein sequence | MEEKNKSKSI VEAGIMSAIT FVLMMLTSLP GIGTIISFAI PIPIALLYLK YNLKTSICSI VISGILIGFF MGSIYGIQLA ITNGIIGLVL GTCVRKKFSG IKSFIYLIVA NTIGVLIEIA LLFSVFTGIT FNQYINDLVN VFNEAAKISE QMIGSSQANT QMIELMKSMD ASFIINMIPM VLVVVIIMRA FLSYTVGKYI INKLGFKLNS LPPFSKWFFN PILIAAVVLI NLFVMLLVSK GVISNKGMYM LTLNLLFAML IIQGLAVVSN LLKYRYRFSN FLIVFISILM VTSIPQLFGI LGLVDVLIDI RGVDPNSLGS YIKEKLKRKL Q
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