| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2240 |
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| Symbol | rph |
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| ID | 4204122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2453553 |
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| End bp | 2454299 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642566792 |
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| Product | ribonuclease PH |
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| Protein accession | YP_699516 |
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| Protein GI | 110801547 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000519616 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAGTA GTGGAAGAAA AAAAGAACAG ATAAGACCAG TTAAAATAAC AAGAAACTTT
ACTAAATATG CAGAAGGTTC TGTATTAATA GAAGTTGGGG ATACTAAAGT ATTATGTACT
GCTTCAATAG AAGAAAAAGT TCCACCTTTT TTAAAGGGTT CTGGAGAAGG GTGGATAACT
GCTGAATATA ACATGATTCC AAGAAGTACT CAAAGTAGAA AACAAAGAGA TATAAATAAA
CTTAAAATAG ATGGAAGAAC AATGGAAATA CAAAGACTTA TAGGAAGAGC TCTTAGATCA
GCTGTAGATA TGAAAGCTTT AGGAGAAAAA ACTATTTGGA TAGACTGTGA TGTTCTTCAA
GCTGATGGGG GAACTAGAAC GACTTCTATT ACAGGCTCAT TTGTGGCGCT AGTTGATGCT
GTAAATAAAC TTCATCAAAA GAAACCTTTT AATGTTTATC CTATAAGACA TTTTGTCAGC
GCAGTAAGTA TTGGAATAGT AGGAGAAGAG AAAGTATTAG ACTTATGCTA TGAAGAAGAC
CATGTAGCTA AAGTAGATAT GAATGTTGTA ATGATAGAAG AGGGAGAATT TATAGAAATT
CAAGGTACTG GAGAGATTGG ACCTTTTTCA AGAAAAGAAT TAGATGAATT ATTAAATCTT
GCTGAAAAAG GAGCGAAACA AATGATACAA GCACAAAAAA ATGCTTTAAA GACAGATTCT
TTATGGATCG GAACAGGGAG AGAGTAA
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| Protein sequence | MRSSGRKKEQ IRPVKITRNF TKYAEGSVLI EVGDTKVLCT ASIEEKVPPF LKGSGEGWIT
AEYNMIPRST QSRKQRDINK LKIDGRTMEI QRLIGRALRS AVDMKALGEK TIWIDCDVLQ
ADGGTRTTSI TGSFVALVDA VNKLHQKKPF NVYPIRHFVS AVSIGIVGEE KVLDLCYEED
HVAKVDMNVV MIEEGEFIEI QGTGEIGPFS RKELDELLNL AEKGAKQMIQ AQKNALKTDS
LWIGTGRE
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