| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2076 |
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| Symbol | |
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| ID | 4204294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2302258 |
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| End bp | 2303577 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 22% |
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| IMG OID | 642566626 |
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| Product | sensor histidine kinase VncS |
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| Protein accession | YP_699385 |
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| Protein GI | 110802512 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0315771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATT TAAAAATATT TCCTAAAATT TTTATACAAA CATTCTCTGT TATTGGAATA
ATAATTATAC TAATGCATTT GTTAATATTC TTAATTTTCC CTAGGACATA TTTAGATACC
AGAAAAGCAG AAATTTATAA TAAGGCAAAT GAAATTTCTA GGAATATGAA TGGAAAAGAA
TTAAATTACA TAGAGCAAAC TTTAGATTTT TATTCTAATA CAGGTGATAT AAAGGCATTT
ATAAAAGATG TGAACGACAA TAATGAAGTA AAAATAAAAA AACAAGTGAA TATTAATTTA
GAAAGCAACA ATAATTCTTT GATAATTGAA GAAAGGGAAA TAACGATTAA TAATGGTAAA
AAAATATATC TACAATTTGT TTCTATAGCT GATATGCAAA AAGATGCAAA AAATTTAAGT
CTTAAATTTT TACCATATTC ATTATTAATA TCACTTTTAT TTTCGTCAAT CATTTCTTTA
GCTTATGCTA AGTCAATAAA GAATAACATA CAGGAAATAA AAAATGTTAC AGATAAAATG
ATGAAACTTG ATAAAAAAGC ACGTTTAAAG CTTGACTCTA ATGATGAAGT TGGACAATTA
AAAGAACAAA TTAATGATTT ATATACTACA TTATTAAGAA CAATTGATGA TTTGAAATTT
AAGAACAAAG AAATATTAAA ACTGGAAAAG TTAAAATATA ATTTTTTTAA AGGAGCATCT
CATGAACTTA AAACTCCTCT TGCTAGTCTT AAAATAATAC TAGAGAACAT GAAATATAAT
ATTGGAAAAT ATAAAGAAAG AGATATTTAT ATTAACGAAT GTATTGATAT TGTTGATAGT
TTAACAAAAA ATATTTCTCA AATACTATCA GTTCATTCCA TAGAAAACTT GAATAATGAT
GAAGAATATT TAAAAATAAA TGATGTATTA GAAGGCGTAT TAAAAAAGTA TGAAGTATTA
GTAAATCAAA AGAATATAAC TATAAATAAC TATATATTAG ACGAGAATAT TTATATAGGA
AAAACGGCTT TAAATATCAT TCTATCTAAT TTGATTAGTA ATGCAGTAAA ATATACTGAT
GCAAATGGTA TTATTAATAT TGGATTAGAT AGAGATTGGT TATACATTGA AAATTCATAT
GGAGATAATA AAGTTTCTGA TATAGATAAA TTATTTGAGT TTAAGTTTGA TTTGAATAAG
GAAAATAGTA ATGGATTAGG ATTATATATT GTAAGCAATC TTTTGAATAA CTATAATAAA
AAATTTAAAG TATTACAAAA TAGAGAGTAT TTTGTATTTA AAATAAAATT ATCTTCTTAA
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| Protein sequence | MKDLKIFPKI FIQTFSVIGI IIILMHLLIF LIFPRTYLDT RKAEIYNKAN EISRNMNGKE
LNYIEQTLDF YSNTGDIKAF IKDVNDNNEV KIKKQVNINL ESNNNSLIIE EREITINNGK
KIYLQFVSIA DMQKDAKNLS LKFLPYSLLI SLLFSSIISL AYAKSIKNNI QEIKNVTDKM
MKLDKKARLK LDSNDEVGQL KEQINDLYTT LLRTIDDLKF KNKEILKLEK LKYNFFKGAS
HELKTPLASL KIILENMKYN IGKYKERDIY INECIDIVDS LTKNISQILS VHSIENLNND
EEYLKINDVL EGVLKKYEVL VNQKNITINN YILDENIYIG KTALNIILSN LISNAVKYTD
ANGIINIGLD RDWLYIENSY GDNKVSDIDK LFEFKFDLNK ENSNGLGLYI VSNLLNNYNK
KFKVLQNREY FVFKIKLSS
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