Gene CPR_2006 details

Gene Information

• Locus tag: CPR_2006
• Symbol: grpE
• ID: 4205606
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2212532
• End bp: 2213158
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 642566556
• Product: heat shock protein GrpE
• Protein accession: YP_699315
• Protein GI: 110802784
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0576] Molecular chaperone GrpE (heat shock protein)

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGGATA ATAAAGATTT TAACGAAGAG TTAAAGGAAA GTATCCAAGA AGAATTAGAT 
AACGAAACAA AATCTGAAAA TCCTAATATT GATGAAGAGG TAGAAGAAGT TTCAGAAGAT 
ATTAAGGCTG ATGAAAAAGT TATTGATTTT GAAGAATTAA AGGCTTTAAA GGAAGAAAAT 
ACTATGTTTA AAAGTAAAAC AAAGAAATTA GAAAATGAAT TAGAGGCCTT AAAAGATAGA 
TTATTAAGAA TATCTTCAGA GTATGAAAAT TACAGAAAAA GAACAGATAA AGAAAAAGAA 
AGAATATATA CTGATGCATG TGAAGATGTT TTAATCAAAA TGCTTCCAGT ATTAGATAAC 
TTAGAAAGAG CCTTAGCTGT AGATGGAACT GTTGAAGATC TTAAAAAAGG TGTTGAAATG 
ACAGTGAGAC AATTTGAAGA TGCTTTAGAA AAACTTCAAG TTGAAGAAAT ATCTACAGAA 
AATGGTTTTG ATCCAGAATT ACATCAAGCA ATGATGGTTG TGGAACAAGA AGGCTCAGAG 
CCAAATCAAG TAGCTCAAGT ATTCCAAAAA GGATACAAGA GAGGGGATAA GGTTATCAGA 
CATTCAATGG TAACTGTAAC TAAATAA 

 

Protein sequence

MVDNKDFNEE LKESIQEELD NETKSENPNI DEEVEEVSED IKADEKVIDF EELKALKEEN 
TMFKSKTKKL ENELEALKDR LLRISSEYEN YRKRTDKEKE RIYTDACEDV LIKMLPVLDN 
LERALAVDGT VEDLKKGVEM TVRQFEDALE KLQVEEISTE NGFDPELHQA MMVVEQEGSE 
PNQVAQVFQK GYKRGDKVIR HSMVTVTK