Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1895 |
Symbol | glyA |
ID | 4205095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2093079 |
End bp | 2094311 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642566445 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_699205 |
Protein GI | 110802007 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTG ACAACTTAGA AAGAGAAGAT GAGCAAATTG CACATCTTGT TCAAAAGGAA AAGGAAAGAC AAGAAAATAG TATAGAGCTT ATAGCTTCAG AAAACTTTGT TAGCAAAGCT GTTATGGAAG CTATGGGATC ATATTTAACA AATAAATATG CTGAGGGTTA CCCTTCAAAA AGATACTATG GTGGATGTCA CGTAGTAGAT GAGGTTGAAG ATTTAGCAAG AGAAAGAGTA AAAAAATTAT TTGGGGCTGA GCATGCTAAT GTACAACCAC ATTCAGGATC ACAAGCTAAT ATGGCTGTTT ATTTTTCAAT ATTAGAGTCA GGTGATACTG TATTAGGAAT GGATTTAAGC CATGGAGGAC ACTTAACTCA TGGTTCACCA GTTAACTTTT CAGGTAGATT ATTTAATTTT GTGTCATATG GTGTAGATAA AGAAACAGAA ACAATAAACT ATGAAACTGT AAGAGAATTA GCTCTTAAAC ATAAACCTAA ATTAATAGTT GCAGGAGCTA GTGCATATTC AAGAATTATA GATTTTAAAA CTTTAAGAGA GATAGCAGAT GAGGTAGGAG CATACTTAAT GGTTGATATA GCTCACATTG CAGGGCTTGT AGCTACAGGC TTACATCCAT CACCAGTTCC TTATGCTGAT TTTGTTACAT CAACAACTCA TAAAACTTTA AGAGGACCAA GAGGAGGATT AATACTTTGT AAAGAAAAAT TTGCAAAAGT ATTAGATAAA AATATTTTCC CAGGAATACA AGGTGGTCCT TTAATGCATA TAATAGCTGC AAAGGCTGTT TGTTTTAAAG AAGCATTAGA ACCAAGTTTT AAAACATATA TGGAGCAAGT TGTTAAAAAT GCACATGTTT TAGCAGAAGC TTTAGAATCT TATGGATTTA AATTAGTTTC AAATGGAACT GATAACCATT TAATACTTGT TGATTTAACT AATAAAGATA TAACTGGTAA AGATGCAGAA ATTCTTTTAG ATAGTATAGG AATAACTTTA AATAAAAATA CTGTACCAAA TGAAACAAGA AGCCCATTTG TTACTAGCGG TGTTAGAATA GGAACTCCTG CTATAACAAC TAGAGGATTT AAAGAAGAAG AAATGAAAGA AATAGCTTCT ATAATAAATG ATGCTATTAA AGAAAAAGAT GGAGATTTAG AACCATTAAA AGCAAGAGTT AAAGCTTTAT GTGCTAAGTA TCCTTTATAT TAA
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Protein sequence | MNFDNLERED EQIAHLVQKE KERQENSIEL IASENFVSKA VMEAMGSYLT NKYAEGYPSK RYYGGCHVVD EVEDLARERV KKLFGAEHAN VQPHSGSQAN MAVYFSILES GDTVLGMDLS HGGHLTHGSP VNFSGRLFNF VSYGVDKETE TINYETVREL ALKHKPKLIV AGASAYSRII DFKTLREIAD EVGAYLMVDI AHIAGLVATG LHPSPVPYAD FVTSTTHKTL RGPRGGLILC KEKFAKVLDK NIFPGIQGGP LMHIIAAKAV CFKEALEPSF KTYMEQVVKN AHVLAEALES YGFKLVSNGT DNHLILVDLT NKDITGKDAE ILLDSIGITL NKNTVPNETR SPFVTSGVRI GTPAITTRGF KEEEMKEIAS IINDAIKEKD GDLEPLKARV KALCAKYPLY
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