Gene CPR_1719 details

Gene Information

• Locus tag: CPR_1719
• Symbol: gmk
• ID: 4206424
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 1914597
• End bp: 1915247
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 642566269
• Product: guanylate kinase
• Protein accession: YP_699034
• Protein GI: 110803550
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0194] Guanylate kinase
• TIGRFAM ID: [TIGR03263] guanylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAATA AGATACATAA GAATAATAGA GGTGTATTAA TAGTTATTTC TGGTCCTTCA 
GGTGCAGGTA AGGGAACTAT TTGTAAAGCC TTATTAGAAA AACACGATGA TATATTCATA 
TCAGTTTCTG CTACAACTAG AAACCCTAGA GTAGGAGAAG TTGATGGAGT TAATTATCAT 
TTCTTAACAA AAGAAGAATT TAAACAAAGA ATAGCAGAGG ATGATTTCCT TGAGCATGCT 
GAAGTATATG GAAATTATTA TGGAACTCCT AAATCAAGTG TTGAAAAAAT GCTTGATGAA 
GGAAAAAACG TAATATTAGA AATAGATATA CAAGGTGCTT TAAAAGTTAA GGAAAAGGCT 
ACTGATGGAG TATTTATCTT TATATTACCT CCTTCAATGG AAGAGCTTAA GCAAAGAATA 
ATAAAAAGAG GTAGCGAAAC TCCAGAAAGT TTAATGACTA GATTTAAGTC AGCTTATAAA 
GAAATTAATT ATGTGTCAAA ATACAATTAT GCAGTAGTTA ACGATAATGT AGAAGATGCA 
GTAAAGAAAA TAGAAGCTAT ATTATTAGCA GAAAAATGTA GAGTAGATAG ATTAAAAGAA 
AACTTATTAG AGTCAAAGGA GGACGAAATG CATGAACAAC TCTATGATTA A 

 

Protein sequence

MMNKIHKNNR GVLIVISGPS GAGKGTICKA LLEKHDDIFI SVSATTRNPR VGEVDGVNYH 
FLTKEEFKQR IAEDDFLEHA EVYGNYYGTP KSSVEKMLDE GKNVILEIDI QGALKVKEKA 
TDGVFIFILP PSMEELKQRI IKRGSETPES LMTRFKSAYK EINYVSKYNY AVVNDNVEDA 
VKKIEAILLA EKCRVDRLKE NLLESKEDEM HEQLYD