| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1548 |
|---|
| Symbol | |
|---|
| ID | 4206551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1736067 |
|---|
| End bp | 1736435 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 642566100 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_698865 |
|---|
| Protein GI | 110801802 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1832] Predicted CoA-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.16153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGCTA AAGACTTTTT GGATTTTAAA AATTGGTGTG TTGTTGGTGA TGTAGGAAAT
GAAAAAAAGT ATGCATATAG AATTTTAAAT AAACTTAAAG AAAATGGATA TAATGCTTTT
GGAGTTAGTT TAAAAGAGGG AGAAAATATA TTTAAAAGCT TAAAAGAAGT TCCTTGTAAT
ATTGAAGTTA TAGACTTATG TATAAATCCT GTTAAGGGTA TAGAATTTAT TAAAGAGGCT
AAAACTTTAG GAATAAATAA GGTTTTAATT CAACCAGGAG CTGAAAGTAA AGAGATACTT
AGTTTTTGTA AGAAAAATAA CATCTGTGCT ATAGAAGGAT GTGCATTAGT TGAATTAAGT
AGAAGATAA
|
|---|
| Protein sequence | MLAKDFLDFK NWCVVGDVGN EKKYAYRILN KLKENGYNAF GVSLKEGENI FKSLKEVPCN
IEVIDLCINP VKGIEFIKEA KTLGINKVLI QPGAESKEIL SFCKKNNICA IEGCALVELS
RR
|
|---|
| |