Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1404 |
Symbol | |
ID | 4205490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1578465 |
End bp | 1578902 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565958 |
Product | hypothetical protein |
Protein accession | YP_698723 |
Protein GI | 110802205 |
COG category | [R] General function prediction only |
COG ID | [COG4492] ACT domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.600652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGGAA ATTTATTAGT TATAGATAAA AGAGTATTAC CAGAAGTTTT TGAAAAGGTA ATAAACGCTA AAAGACTTTT AAAAGAAGGA AAAGTTAAGG AGATAACAGA AGCTACAAAG CAAGCTGGTA TTAGTAGAAG TGTTTATTAT AAGTATAAAG ACTATATATT TGAATTTGCA GAAACCCTTC AAGGTAGAAA AGTTATATTT AATATGGTTG TTACTCATGA AAAGGGAGTT TTATCATCTG TTTTAAATAT ATTATCAGAT GTTGGGGGAA ATATACTTAC AATAGATCAA GGGCTACCTA TACATGGACT AGCTCATGTA AGCTTCACAA TAGACATATC AACTATGAAG TGTGATATAA AGGAAATGTT AAATGAAATA GAATTAGTTC ACGGTGTTGA AAAGGTAGAA TTTGTTGCCA TGGAATAG
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Protein sequence | MEGNLLVIDK RVLPEVFEKV INAKRLLKEG KVKEITEATK QAGISRSVYY KYKDYIFEFA ETLQGRKVIF NMVVTHEKGV LSSVLNILSD VGGNILTIDQ GLPIHGLAHV SFTIDISTMK CDIKEMLNEI ELVHGVEKVE FVAME
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