Gene CPR_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1404 
Symbol 
ID4205490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1578465 
End bp1578902 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content30% 
IMG OID642565958 
Producthypothetical protein 
Protein accessionYP_698723 
Protein GI110802205 
COG category[R] General function prediction only 
COG ID[COG4492] ACT domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.600652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGAA ATTTATTAGT TATAGATAAA AGAGTATTAC CAGAAGTTTT TGAAAAGGTA 
ATAAACGCTA AAAGACTTTT AAAAGAAGGA AAAGTTAAGG AGATAACAGA AGCTACAAAG
CAAGCTGGTA TTAGTAGAAG TGTTTATTAT AAGTATAAAG ACTATATATT TGAATTTGCA
GAAACCCTTC AAGGTAGAAA AGTTATATTT AATATGGTTG TTACTCATGA AAAGGGAGTT
TTATCATCTG TTTTAAATAT ATTATCAGAT GTTGGGGGAA ATATACTTAC AATAGATCAA
GGGCTACCTA TACATGGACT AGCTCATGTA AGCTTCACAA TAGACATATC AACTATGAAG
TGTGATATAA AGGAAATGTT AAATGAAATA GAATTAGTTC ACGGTGTTGA AAAGGTAGAA
TTTGTTGCCA TGGAATAG
 
Protein sequence
MEGNLLVIDK RVLPEVFEKV INAKRLLKEG KVKEITEATK QAGISRSVYY KYKDYIFEFA 
ETLQGRKVIF NMVVTHEKGV LSSVLNILSD VGGNILTIDQ GLPIHGLAHV SFTIDISTMK
CDIKEMLNEI ELVHGVEKVE FVAME