Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1360 |
Symbol | rnz |
ID | 4206011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1531624 |
End bp | 1532574 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565914 |
Product | ribonuclease Z |
Protein accession | YP_698680 |
Protein GI | 110803916 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0966966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAATG TAACCTTGTT AGGAACAGGG GGAGGCATGC CTATGCCAAA TAGATTTTTA TCATCAGTTG TTATGAATTT CAAGGGGAGA AAAATTCTTT TAGACTGTGG AGAGGGCACG CAGGTTTCTA TGAGGGTAAA TGGAACTGGA TTTAAAAGTA TAGATATTAT TTGTATAAGT CATCTTCATG GAGATCATAT ATATGGATTA CCAGGATTAC TTTCTACAAT TGGGAATAGT GGAAGGGTAG AAGAAATATA TATAATAGGA CCTAAGGGAA TAAAAGAGGT TATAGATGGA TTTTTAATAA CTCTTCCATA TCTTCCATAT AAACTTAACA TACTAGAAGA TGTAAGTGAT TTAGAATTCA TGGTTAAAAA AGAAAAAATG GAATTAGTTG AATTGAATGA AAAAATAAGT TCGGATTTAA GTATAAAAAC TCTAGAATTA GACCATTCTT CTCCTTGTTT AGGATACTCT TTTAATATAA GGAGAGGAAG AAAATTTAAT GTTGAAAAAG CTTTAATGAA TAAAGTTCCA AAGGAAGTGT GGTCTAAACT TCAAAGAAAT GAGGAAGTTA GTTTAAATAG AGTTAAATAT TATAGTTATA TGGTCTTAGG AGATGAAAGA AAGGGAATAA AATTAAGTTA CACAACAGAT ACAAGACCTA CAGAGGATAT ACCAGGTTTT ATAAAGGAAA GTGATTTATA CATATGTGAA GGGACTTATG GAAGTGAAGA GGATATGCAT AAGGCCATAA AAAATAAACA TATGACTTTT AAGGAGGCAG CTGATTTAGC TAAAAAGGGT CAGGTAAAGA AATTATTATT AACTCATTTT AGTCCAGCTA TTAATGATCC AAAGGAATAT ATACATAATG CAAGAGAAGT ATTTGAAAAT TCCCATGCTG GAAGTGATGG AGAGGAAAGA ATTTTAAATT TTAAAGAATA A
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Protein sequence | MLNVTLLGTG GGMPMPNRFL SSVVMNFKGR KILLDCGEGT QVSMRVNGTG FKSIDIICIS HLHGDHIYGL PGLLSTIGNS GRVEEIYIIG PKGIKEVIDG FLITLPYLPY KLNILEDVSD LEFMVKKEKM ELVELNEKIS SDLSIKTLEL DHSSPCLGYS FNIRRGRKFN VEKALMNKVP KEVWSKLQRN EEVSLNRVKY YSYMVLGDER KGIKLSYTTD TRPTEDIPGF IKESDLYICE GTYGSEEDMH KAIKNKHMTF KEAADLAKKG QVKKLLLTHF SPAINDPKEY IHNAREVFEN SHAGSDGEER ILNFKE
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