Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1344 |
Symbol | |
ID | 4204834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1516389 |
End bp | 1517420 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642565898 |
Product | aldose 1-epimerase |
Protein accession | YP_698664 |
Protein GI | 110803162 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAATT TGGTTATAGA AAGTAAAATT AATGATGAAA TAAGTAAAAT AATATTAAAA AATAATAAAG TATCTGTGGA AATATTAAGC TTAGGTGCTA TTGTAGAAAA AATAAATGTA GAGGATAGAT ATGGAAATAA AGAAAATATA GTGCTTGCTT ATAAGGATGA GGAAAGCTAT ATTGAAAATC CTTCAAGTTT AGGTTCTATA GTAGGAAGAG TAGCAGGTAG AATAGGAAAG GGTTCCTTTA AATTAAATGG TATTAATTAT GAATTAGATA AAAATAATAA TGGAAACTGC CTTCATGGAG GATATAAAGG TTTTAGTAAA AAAATCTGGG ATTATTCATA TAGTGAAGAT GAAGAAAAAT CTACAGCAAT ATTTACTTCT TTTAGTAAGG ATGGAGAAGG GGGATTCCCA GGAAATTTAA AGGTTCAGGT TACTTATTCT CTAGAAGGAG ACAAGCTTTC CATAGAATAT AAAGCTTCTT CAGATAAAGA TACAGTAGTA AATTTAACTA ATCATTCATA TTTTAATTTA TCAGGAAATA ATAAAAGAAA TATATTAGAA CAAAAGCTTT ATATAGATTC AGATAAAATA TGTGAGTTAG ATAAAAATTT AATTCCAACA GGAGAGTTTT TAAGTGTAGA AAAAACACCT TTTGATTTTA GGGAGCCAAA AAAGATAGGT GAGGATATAA ATAAAAACCA CTTGCAATTA GAAATTGGAT CAGGATATGA TCATCCATGG GTTTTAAATA AGAAGGGTGA TTTTGATGCA ATTTTAGTAG ATGAAGAATC AGGAAGAATT ATGAAGATTA AGACAGATCA AAAGGCAGTA GTATGTTATT CAATGAATTT TCCAGATGAA TTGCCTTTAG AAAACGGCAA AGTAGCCAAA AAGCATGATG GAATATGTTT TGAAACACAA AATTTACCAG TAGGATATGA TGATTGCTTC TTAGATGGAA TAATACTTAA AAAGGATGAA GAGTATTATC AAAAAACAAC TTTTAAATTT GAGTGTATAT AA
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Protein sequence | MNNLVIESKI NDEISKIILK NNKVSVEILS LGAIVEKINV EDRYGNKENI VLAYKDEESY IENPSSLGSI VGRVAGRIGK GSFKLNGINY ELDKNNNGNC LHGGYKGFSK KIWDYSYSED EEKSTAIFTS FSKDGEGGFP GNLKVQVTYS LEGDKLSIEY KASSDKDTVV NLTNHSYFNL SGNNKRNILE QKLYIDSDKI CELDKNLIPT GEFLSVEKTP FDFREPKKIG EDINKNHLQL EIGSGYDHPW VLNKKGDFDA ILVDEESGRI MKIKTDQKAV VCYSMNFPDE LPLENGKVAK KHDGICFETQ NLPVGYDDCF LDGIILKKDE EYYQKTTFKF ECI
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