Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1256 |
Symbol | |
ID | 4204112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1410163 |
End bp | 1410936 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642565812 |
Product | hypothetical protein |
Protein accession | YP_698578 |
Protein GI | 110801440 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000112269 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAGAGTT TAGTTATTAA GTTTATTTCA ATTTTTTTAG GAATAATATG TATATTATAT TATATCTTAG TTAATGCTTT AAGTGGAAAA ACAACCTTTA GCTCTTTTTA TTTAATTTTA GGAGTAGTAA TTATATTATA CACCCTTTTT ATAGATAAAC TTTTAAAATT ACAGTGGTTT AAAAATGTGT ACAAGCCTAT GAAGATTTTA GCTCTTATAT GCATAAGTAT ATTTATAATA GTGGAGGGAG CAATAATTTT CTATCCTAAA AAATCCTTAA AGCCTTGTAA TTATATAGTT GTTTTAGGGG CTGGAATAAG AGGAGAAAAT TTAACTGCCA CATTAAAAGA TAGATTAGAT AAGACCATAG AATATTTAGA GAAAACTGGA TTTAATGGAG AGATTATAGT ATCTGGTGGA CAAGGTCCTG GAGAGAGCAT AACTGAGGCT TATGCAATGG AAAAATATCT AGTGGAAAAT GGAGTGCCTA AGGATAAAAT TGTACTTGAA AATAAAGCAA CTAGTACATA CGAAAATCTA AATTATTCTA AGAAGATCAT AGAGAACTTA AGTGGAAAGC CTATAAAAGA CTTAGATATT TTAGTTGTTA CCACAGATTT TCATGCTATG AGAAGCAATC TTTTAGCTAA AAGAAATGGA TATGATAAGG CTTATTTATA TACAAGTAAG ACTCAGTGGT ATTTAGTACC TTCTATGTAT GCAAGAGAAT TTTTTGCTTT TTGTAAATCA TATTTTCTTG ATAAGAATAT TTAA
|
Protein sequence | MKSLVIKFIS IFLGIICILY YILVNALSGK TTFSSFYLIL GVVIILYTLF IDKLLKLQWF KNVYKPMKIL ALICISIFII VEGAIIFYPK KSLKPCNYIV VLGAGIRGEN LTATLKDRLD KTIEYLEKTG FNGEIIVSGG QGPGESITEA YAMEKYLVEN GVPKDKIVLE NKATSTYENL NYSKKIIENL SGKPIKDLDI LVVTTDFHAM RSNLLAKRNG YDKAYLYTSK TQWYLVPSMY AREFFAFCKS YFLDKNI
|
| |