Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1210 |
Symbol | |
ID | 4204761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1357144 |
End bp | 1357920 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 22% |
IMG OID | 642565766 |
Product | hypothetical protein |
Protein accession | YP_698532 |
Protein GI | 110802472 |
COG category | [S] Function unknown |
COG ID | [COG4905] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000120953 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAACA TTATATATAA TATTTTATAT ATAATAATAT ATAGCTTTTT AGGGTGGTGC TGTGAAGTTA TATATTGTTA TATATTAGAT CACAAGTTTA CAAATAGAGG ATTTTTAAAT GGGCCATTAT GCCCTGTATA TGGATTTGGA GCTTTTTTTG TTTTAACATT TTTAGATTTG TATAAAAGAA ATTTAATATT AGTATTTATA TTAGGAATAG TAATTACATC AATTTTAGAG TATGTAACAT CTTTTTTATT AGAATCGATA TTCCATACTA AATGGTGGGA TTATTCAAAA CACAAGTTTA ATATTCACGG AAGAGTATGT TTACTTAATT CTACGCTATT TGGTATATTA TCAGTTATAT TAGTTGAATT TATAAATCCT ATTATAGTAG ATTTCGTCAG TAAATTTCCA AAAAAGATAA TTTTTCTTAT AACAATAATC TTATTAACTC TAATTGCCAT TGATTTAATA GTAACAGTAC AAGCTATGAT TAAATTAAAT GCAAATTTAC ACAATCTTCA AAATTTATCT AAAGAATTTG AAAAACTTGG AATTTCTTTT ATAGATAAGA CAGAGAAAGA ATTAGAAATT ACTATTAGTA AAATTAAACA TGAATCCAAT TTAAAAGAAG AACTTTTAAA TAAAGTTCAT TCTATAAGAA GAAATAATTT ACTTGAAAAA AGGCTTTTAA AAGCATTCCC TAATATGAAA CATAAGAGAT ACAATGAACT ATTACAAAAA TTAAGAAAAT ATTATAAATT AAAATAA
|
Protein sequence | MENIIYNILY IIIYSFLGWC CEVIYCYILD HKFTNRGFLN GPLCPVYGFG AFFVLTFLDL YKRNLILVFI LGIVITSILE YVTSFLLESI FHTKWWDYSK HKFNIHGRVC LLNSTLFGIL SVILVEFINP IIVDFVSKFP KKIIFLITII LLTLIAIDLI VTVQAMIKLN ANLHNLQNLS KEFEKLGISF IDKTEKELEI TISKIKHESN LKEELLNKVH SIRRNNLLEK RLLKAFPNMK HKRYNELLQK LRKYYKLK
|
| |