Gene CPR_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1202 
Symbol 
ID4206524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1347841 
End bp1348620 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content31% 
IMG OID642565758 
Productbeta-lactamase, putative 
Protein accessionYP_698524 
Protein GI110801832 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.291582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAG TTCAAAAATA TTTAGAGAGC AGAATTGGTT CGTATAGCTT TTTCTTTGAA 
GATCTGAAGA GTGGTTATAC TTATGGTTAT AATGAAAACG TTAAAATGAT TTCAGCAGGT
TGTATGAAAT TACCTATAGC TATAGCTCTT ATAAAAGAAG TAGAGGAAGG CAAAATAGAC
TTTTTGGATA AAGTTAAAAT AGAAAGTTCA GATAAGGTCT ATGGAACTGG TATAATACAT
GAGTTTGGAG AGAGGGATTA TACTGTATTT GAACTTATGG TAGCAATGCT AATTCAAAGT
GATAATACAG CGGCAAATAA AATAATTGAT TTAGTCGGTA TGGATAAAAT AAATGAAACT
ATTAAAGAAT TTGGTATGAA AAATACTGAA CTTAATAGAA AAACTGCCGA TGAAAGAAAT
TTCAAATCAG ATGTAGAAAA TTATACAACA GCTTATGATT TAACTTTAGC CTGGAAAAAA
CTTAGTGAGG GTTCTTTCTT AAGTAAAGAA AACTCTCAAA TGCTTATAGA TATACTTACA
AGACAACAGA TTAAAAACAA ACTAGCTTTA TATATACCAG ATAATCTTAA GTTTGATATA
TCAAGTAAAA CAGGAGACAA AAAGGGAGTT GAGAATGATA CAGCCTTAAT TCATACTCAA
AAAGGAAACT TTGCTTGTAC AGTAATGTCT AGTGGAATTC CTAATTCAGT CTACGGGACT
GTGACCTTGG CAAAGTCTGG TAAAATGACC TGGGACGCCA TCATGAACAA TTGGCACTAA
 
Protein sequence
MKEVQKYLES RIGSYSFFFE DLKSGYTYGY NENVKMISAG CMKLPIAIAL IKEVEEGKID 
FLDKVKIESS DKVYGTGIIH EFGERDYTVF ELMVAMLIQS DNTAANKIID LVGMDKINET
IKEFGMKNTE LNRKTADERN FKSDVENYTT AYDLTLAWKK LSEGSFLSKE NSQMLIDILT
RQQIKNKLAL YIPDNLKFDI SSKTGDKKGV ENDTALIHTQ KGNFACTVMS SGIPNSVYGT
VTLAKSGKMT WDAIMNNWH