| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1048 |
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| Symbol | |
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| ID | 4206361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1194295 |
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| End bp | 1194600 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 642565604 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_698370 |
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| Protein GI | 110803432 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000208047 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAAGAG AAATAATAAA CTATCTAAAA GAAAACTATA AAGAAGAAAT TTCAATCGAT
CATATATGTA ACCATGTTGC TTTTAGTAAA TATTATACAT GCCGTACCTT TAAAGAGGTA
ACAGGGCAAA CTATTTTAGA TTATATTAAT CATATTAGAT GTATTAATGC TAGAAATTTA
ATCCTCTATA ATGGATATAC TATATCTGAA AGTGCTTATA AAAGCGGCTT TAATAACTTA
TCTTATTTTT CAAAAACTTA TAAAAAGTAT ATGGGATTAC TTCCATCTGA AGAAAAAAAT
ACATAA
|
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| Protein sequence | MVREIINYLK ENYKEEISID HICNHVAFSK YYTCRTFKEV TGQTILDYIN HIRCINARNL
ILYNGYTISE SAYKSGFNNL SYFSKTYKKY MGLLPSEEKN T
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