| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0486 |
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| Symbol | |
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| ID | 4205808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 578381 |
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| End bp | 579097 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 24% |
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| IMG OID | 642565043 |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_697814 |
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| Protein GI | 110802743 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0347807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAAATA TAGCAATATG CGATGATGAA AAAATTCAGC GTAATATACT AAAAGATATG
TTATATAAAA TATGTAATAA AAATAATATG GACGTAATTA TTGATGAATT TTGCTCAGGA
GTAGATTTGT TAAATGTATA TAAAAGAAAT ACAAAAAAAT ATAGTATAGT TTTTTGCGAT
ATACTCATGG ATGAAATGAA TGGAATAGAA TTATTAAGAA AAATTGGAGA ATTAGATACG
TTTATACAAT CTATTTTGAT AACTGGAAGT GAGGAGTATG TTTTTGAAGG GTATGATGTG
GGAGCATTAA ATTATTTAAT GAAACCTGTT TCTTTTGAAA AATTAGAAAA AGAATTTTTA
AGAGCTATAA AAAGTTTAAA TTTTACTAGC CCATCTAGAT ATGCAATAAA TATAAATGGA
AAAACAAATT TTATAGACCT ATCAGAGGTA TTATTTTTTG AGGTTAATAA CAAGACAATT
ACTGCTAATT TATCAAAAGA GAGTATAGAT TTCAATATGA AAATAGCAAC ATTAGAAGAA
GAATTAAAAG ATAGAAATTT TTTAAGGTGT CATAGAAGTT ACTTAGTTAA TATTTCACAT
ATAGATTCTA TTCTGCAAAA TAAGATTATA TTAAAAAATA GTGTTGAGAT ACCTATTGGA
AGAGTTTATA AAAAAGAGTT AAAAACATTC TTGATGAATA GAATAGGTGA TATTTAG
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| Protein sequence | MLNIAICDDE KIQRNILKDM LYKICNKNNM DVIIDEFCSG VDLLNVYKRN TKKYSIVFCD
ILMDEMNGIE LLRKIGELDT FIQSILITGS EEYVFEGYDV GALNYLMKPV SFEKLEKEFL
RAIKSLNFTS PSRYAINING KTNFIDLSEV LFFEVNNKTI TANLSKESID FNMKIATLEE
ELKDRNFLRC HRSYLVNISH IDSILQNKII LKNSVEIPIG RVYKKELKTF LMNRIGDI
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