Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0404 |
Symbol | |
ID | 4205798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 490411 |
End bp | 491757 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642564961 |
Product | putative reticuline oxidase |
Protein accession | YP_697733 |
Protein GI | 110802580 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.993736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGG TTGATTTTTC TAAATTGACT GGTGATTTAG TAACCAGAGA AAATATAGAG TATGAAAAAA GTATAGAATC TTGGAATAGA GCTATAAAAA AATATCCTTT AGGGATAGTT TTTTGTAATA ATATTGATGA TGTAAAAAAT GCTTTAGAAT GGGCTAAAGA AAATAATATT CCATTTAGAA TAAGAGTTGG ACGTCATAAT TATGAAGGAT ACTCCATAGG AAATGATGTA TTAGTAATAG ATTTAAGTAA AATGAATAAT ATAATAATCG ATGAAGAAAA TATGAAAGTC ACTATAGAAG GTGGCGTTAA AAATGAAGAA ATATATGAAG CCTTAGGGGT TTTAGGATAT CCATTTCCAG GAGGGGGATG CCCTACAGTT GGTGTTGTAG GATTTACTCT TGGTGGAGGT TGGGGTTATT CAAGTAGATT ACTTGGGCTT GGATGTGACA ACCTTCTAGA AGTAAAGTTT ATAAATAGTA AAGGGAAAAT TGTTATAGCT AATGAATATG ATAATTCTGA TTTGTTTTGG GCTACTAAAG GTTGTGGAGG TGGAAATTTT GGAGTGGTTG TTTCAATGAC CTTTAAAATT CCTCAAAAAA TAGAAATGGC AACTTTAATA GACATAGATT ATCCTAATGC AGAAAAAGAA GAACTTGTTT ATGTAATAAG AACATTACAA AAAAAGTTTA AAAACTTAGA TAGGAGAATG AACTTAAAAA CAGCTATCTA CAATTCAAAG GATAAGGGAA TTGGAGTTAA GATTACAGGA TTATTTTATG GACATAAAGA AGAAGCTAAT GAAATATTAC TTCCATTTAA ATTGCCAACA AGGGTTAATT TTAATTTAAG TTACATGAGA GTTTTAGAAG CTAATAGAAA GATTGAATAT AGTCATCCTC CTTATGAGAA ATATAAATCA ACAGGAAGAT TTGTATTTAG AGATTATGAT AATTCTGAAA TAGAAAAACT TATAGATATA GTTTCAAATA GAGCAGAGGG GGCATATTAT ACTGCCATAT CCTTTTATGG ACTTGGTGGA GCAGTAAAAG ATATTCATAA GAATTCATCA GCTTTTTACT ATAGGGATGC AAGGTTTATT ATGGGAATAC AATCTGTTTG GGAAGATGAT ATCTTTGCAG AAGAAAATAT AAAATGGATT AAAAATAATT TTAAATACAT AGAAAGCATA ACTACCGGAT CATTTATAAA CTTTCCTTTT AAAGACCTTA AGGATTATGA AGAGGAATAT TATGGAGAAA ATAAAGAGAG ATTGAGAGAA ATTAGAAAAA AATTTGATGA AAATAAATTT TTCTTTTTTG AACAAATTAT AAAATGA
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Protein sequence | MEKVDFSKLT GDLVTRENIE YEKSIESWNR AIKKYPLGIV FCNNIDDVKN ALEWAKENNI PFRIRVGRHN YEGYSIGNDV LVIDLSKMNN IIIDEENMKV TIEGGVKNEE IYEALGVLGY PFPGGGCPTV GVVGFTLGGG WGYSSRLLGL GCDNLLEVKF INSKGKIVIA NEYDNSDLFW ATKGCGGGNF GVVVSMTFKI PQKIEMATLI DIDYPNAEKE ELVYVIRTLQ KKFKNLDRRM NLKTAIYNSK DKGIGVKITG LFYGHKEEAN EILLPFKLPT RVNFNLSYMR VLEANRKIEY SHPPYEKYKS TGRFVFRDYD NSEIEKLIDI VSNRAEGAYY TAISFYGLGG AVKDIHKNSS AFYYRDARFI MGIQSVWEDD IFAEENIKWI KNNFKYIESI TTGSFINFPF KDLKDYEEEY YGENKERLRE IRKKFDENKF FFFEQIIK
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