Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0403 |
Symbol | |
ID | 4205200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 489098 |
End bp | 490111 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642564960 |
Product | GalR family transcription regulator |
Protein accession | YP_697732 |
Protein GI | 110803292 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0625005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTAAATG AAGGCGCTAA GTTAACCATA AATGATATTG CTAAAAAAGC TAAAACTTCA AAAACTACGG TATCATTTTA TTTAAATGGT AAATTTGATA AAATGTCCCC GGATACAAAA AGAAGAATAG AACAGGTTAT TGAAGAAACA AATTATAGTC CAAACATAAT GGCAAGAAGT TTAAAATTAA AAAAATCAAA TTTAATAGGT GTTGTAGTTG CAGATATAAC AAATCCTTTT AGTAGTAATA TAGTTAAAGG AATTGGGGAG ATTACTAGAA GAAAGGGTTA TCAAATATTA GTAGGTAGCA CTAATTTAGA TTATTACAAC GAGGAAGAGT ATTTTAAAAA GATGCTAGAT ATGGGGGTTG ATGGCTTTAT AGTTCAACCT ACTAAAAATT TTGACAAGTT ATATCCAGCA ATAAAAAATA AGGGTAAGAA AATCGTAGTA TTAGATAGTG TTTCTTCAAG GTACACTGGA AAATGGGTGA AAACCAATAA CTACGAAATA GTCTATGAAG CAGTTTTAAA GTTAGCTGAA AAGGGATATG AAGAGTTTAT TTTAGTAACA GAAGCTCCAG ATAAATTAGC AGCAAGAATG GAAAGAAAAA CTGGTTTTGA AGATGCTGTA AATAAGATAA ATTGCAAAAG TTTTATTGAA ATTATAAATG AAAATACAGA GGTTGATGAA ATTGCTGAGA TGCTTAAAAT AAATATAAGC AATAATAAGA AAACTTTGGT ATTTGCTATA AATGGTAAAA TACTTCAAAA GGTTTTTAAG GCTGTAAAAA TGGAAGGATT TGATGTTCCA AGTCATGTTG GAATAATTGG ATTCGACAAA TGGGATTGGA CAATGTATGC AAATCCATCT GTAACTACAA TAGATCAACC AACTTATGAA GAAGGAAAAT ATGCTGCTAA AATGCTTATT GAAATGATTG AGGAAAATGA TGATTTTTAT AAATCGGAGG TCTTTAAATG TAATATAAAT TGGGAAGAAT CAACTGATTT ATAA
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Protein sequence | MVNEGAKLTI NDIAKKAKTS KTTVSFYLNG KFDKMSPDTK RRIEQVIEET NYSPNIMARS LKLKKSNLIG VVVADITNPF SSNIVKGIGE ITRRKGYQIL VGSTNLDYYN EEEYFKKMLD MGVDGFIVQP TKNFDKLYPA IKNKGKKIVV LDSVSSRYTG KWVKTNNYEI VYEAVLKLAE KGYEEFILVT EAPDKLAARM ERKTGFEDAV NKINCKSFIE IINENTEVDE IAEMLKINIS NNKKTLVFAI NGKILQKVFK AVKMEGFDVP SHVGIIGFDK WDWTMYANPS VTTIDQPTYE EGKYAAKMLI EMIEENDDFY KSEVFKCNIN WEESTDL
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