Gene CPR_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0403 
Symbol 
ID4205200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp489098 
End bp490111 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content29% 
IMG OID642564960 
ProductGalR family transcription regulator 
Protein accessionYP_697732 
Protein GI110803292 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0625005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTAAATG AAGGCGCTAA GTTAACCATA AATGATATTG CTAAAAAAGC TAAAACTTCA 
AAAACTACGG TATCATTTTA TTTAAATGGT AAATTTGATA AAATGTCCCC GGATACAAAA
AGAAGAATAG AACAGGTTAT TGAAGAAACA AATTATAGTC CAAACATAAT GGCAAGAAGT
TTAAAATTAA AAAAATCAAA TTTAATAGGT GTTGTAGTTG CAGATATAAC AAATCCTTTT
AGTAGTAATA TAGTTAAAGG AATTGGGGAG ATTACTAGAA GAAAGGGTTA TCAAATATTA
GTAGGTAGCA CTAATTTAGA TTATTACAAC GAGGAAGAGT ATTTTAAAAA GATGCTAGAT
ATGGGGGTTG ATGGCTTTAT AGTTCAACCT ACTAAAAATT TTGACAAGTT ATATCCAGCA
ATAAAAAATA AGGGTAAGAA AATCGTAGTA TTAGATAGTG TTTCTTCAAG GTACACTGGA
AAATGGGTGA AAACCAATAA CTACGAAATA GTCTATGAAG CAGTTTTAAA GTTAGCTGAA
AAGGGATATG AAGAGTTTAT TTTAGTAACA GAAGCTCCAG ATAAATTAGC AGCAAGAATG
GAAAGAAAAA CTGGTTTTGA AGATGCTGTA AATAAGATAA ATTGCAAAAG TTTTATTGAA
ATTATAAATG AAAATACAGA GGTTGATGAA ATTGCTGAGA TGCTTAAAAT AAATATAAGC
AATAATAAGA AAACTTTGGT ATTTGCTATA AATGGTAAAA TACTTCAAAA GGTTTTTAAG
GCTGTAAAAA TGGAAGGATT TGATGTTCCA AGTCATGTTG GAATAATTGG ATTCGACAAA
TGGGATTGGA CAATGTATGC AAATCCATCT GTAACTACAA TAGATCAACC AACTTATGAA
GAAGGAAAAT ATGCTGCTAA AATGCTTATT GAAATGATTG AGGAAAATGA TGATTTTTAT
AAATCGGAGG TCTTTAAATG TAATATAAAT TGGGAAGAAT CAACTGATTT ATAA
 
Protein sequence
MVNEGAKLTI NDIAKKAKTS KTTVSFYLNG KFDKMSPDTK RRIEQVIEET NYSPNIMARS 
LKLKKSNLIG VVVADITNPF SSNIVKGIGE ITRRKGYQIL VGSTNLDYYN EEEYFKKMLD
MGVDGFIVQP TKNFDKLYPA IKNKGKKIVV LDSVSSRYTG KWVKTNNYEI VYEAVLKLAE
KGYEEFILVT EAPDKLAARM ERKTGFEDAV NKINCKSFIE IINENTEVDE IAEMLKINIS
NNKKTLVFAI NGKILQKVFK AVKMEGFDVP SHVGIIGFDK WDWTMYANPS VTTIDQPTYE
EGKYAAKMLI EMIEENDDFY KSEVFKCNIN WEESTDL