Gene CPR_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0318 
Symbol 
ID4205174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp379345 
End bp379890 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content27% 
IMG OID642564875 
Productlactococcin g processing and transport ATP-binding protein 
Protein accessionYP_697647 
Protein GI110802046 
COG category[V] Defense mechanisms 
COG ID[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACATT ATGTAGTTAT ACATAAAATT AGTGAAAAAG AAATTGTAGC TGCAGATCCT 
GCTAAAGGAA TAGTTAAATA TAAACCTAGT GATTTCTTTA ATATTTGGAC TGGAATCCTT
TTAATAATGA CGCCAACTAC TGAATTTAAG AAGGGAAATG AAGTTAAAGG AGTATTTACT
AGGTTTTTTG ATTTATTAAA GCCACAAAAG GGATTACTTT TTAATATATT TTTAGCTTCA
CTTCTTATAA CGGCATTTGG AATAATAGGT TCCTTTTATT TTAAGTTTTT ATTAGATGAT
ATAGTTCCAA ATAATTTAAG GCAATCATTA ACTGTATTTT CCATAGGATT TATAATTTTA
TCAGTATTTA AGGTTATTAC AGAAGCTTTT AGAACACAAC TTCTTATTCA TTTAGGACAA
CGTTTAGATA TACCATTAAT GCTAGGTTAT TATGATCATG TGGTTAATCT TCCTATGAAT
TTCTTTGGTA CAAGAGAAGT TGGAGAAATT ATATCAAGGT TTAATGATGC ATCAAAGATA
AGATAA
 
Protein sequence
MLHYVVIHKI SEKEIVAADP AKGIVKYKPS DFFNIWTGIL LIMTPTTEFK KGNEVKGVFT 
RFFDLLKPQK GLLFNIFLAS LLITAFGIIG SFYFKFLLDD IVPNNLRQSL TVFSIGFIIL
SVFKVITEAF RTQLLIHLGQ RLDIPLMLGY YDHVVNLPMN FFGTREVGEI ISRFNDASKI
R