Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0159 |
Symbol | arcD |
ID | 4204868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 195692 |
End bp | 197128 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642564714 |
Product | arginine/ornithine antiporter |
Protein accession | YP_697496 |
Protein GI | 110801917 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAGC AACATAATGA ATCAAAAAAA TTAGGGTTTG CTCAATTAGC AGCCTTAATA GTTGGTTCTA TGATTGGTGG TGGAGCTTTC AATCTTCCAT CAGATATGGC AAGAGGAGCT GGTACTGGAG CAGTTATAAT AGGATGGATT ATAACAGGTA TTGGTATGAT AGCTTTAGCT TTTGTTTACC AATCATTAGC TAACAGAAAG CCTGAATTAA CAGGTGGTGT TTATAGTTAT GCGAAAGCAG GGTTTGGAGA ATATATAGGA TTCAATTCAG CTTGGGGATA TTGGTTAAGT GCATGGATAG GAAATGTATC TTATTCAGTA CTTCTATTTG GAGCAGTAGG TTATTTTCTA CCTATGTTTG GTGCAGGAAA TAACGTAGCA TCTATTATTG GCGCATCAGT ATTACTTTGG GCATTTACAT TACTAATATT AAATGGGGTA AGTGGAGCAG CACTTATAAA TCTTATAACC ACTATAGCTA AGTTAGTTCC AATATTCTTA TTTATAGTTA TCTCATTATT TATGTTTAAT TTTGATAAAT TTACTTTCCA ATTTTGGGGT ACAAGTGATT TAGGTGGAAT TGTAACACAG GTAAAGAGTA CTATGCTAGT AACATTATGG TGCTTCATAG GAATTGAGGG AGCTGTAGTT GTTTCAGGAA GAGCTAAGAA ACAAAGCGAT GTAGGTAAGG CAACAGTACT TGGTCTTATA GGAACATTAA TAATATATAT GTTAATAACA TTAATGGCAC TTGGAGTTAT GGACAGAGTT AAACTTTCAG GTCTTGAAAA CCCATCAATG GCATATGTTC TTGAATTTGC AGTTGGTAAA TGGGGAGCAG TTCTTATAAA TTTAGGGTTG ATAATTTCAT TATTTGGATC ACTTCTTGGA TGGGCATTAC TTGCAGCAGA AATTCCTTAT GTAGCAGCAA AGGATGGGGT ATTACCTAAA GTCTTTGCTA AATTAAATAA AAAGGGAACA CCAAGTGGTT CATTAATAAT AACTAATTTA TTAGTACAAG CATTTTTAAT ATTAACTTTA GTAGCAAGCA GTACTTATCA AGCTCTATAT TCAGTAGCTA GTACAGCTAT ATTAGTACCA TATCTTTTAA GTGCTATGTA TGGATTTAAG TTAGCACTAA CAGGTGAAAC TTACGATAAA GATCCTACAG GAAGAACTAG AGATAAAATT TTTGGTGGAA TAGCAACCGT TTACGCTATA TGGCTATGCT ATGCAGCAGG ACTTAAATAT TTATTATTAT GTTTCATATT ATATGCAGTA GGAATTATAT TCTTCTACAT TGGTAAAAAA CAGAATAATA AAGATAGTGT TGTATTTGTA GGAAAAGAAA AAATACTAGC AATAATTGTT TTAGTTATAG CAATTATAGC AATAGTAATG TTATTTAACG GAGCAATAAC CATTTAG
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Protein sequence | MAEQHNESKK LGFAQLAALI VGSMIGGGAF NLPSDMARGA GTGAVIIGWI ITGIGMIALA FVYQSLANRK PELTGGVYSY AKAGFGEYIG FNSAWGYWLS AWIGNVSYSV LLFGAVGYFL PMFGAGNNVA SIIGASVLLW AFTLLILNGV SGAALINLIT TIAKLVPIFL FIVISLFMFN FDKFTFQFWG TSDLGGIVTQ VKSTMLVTLW CFIGIEGAVV VSGRAKKQSD VGKATVLGLI GTLIIYMLIT LMALGVMDRV KLSGLENPSM AYVLEFAVGK WGAVLINLGL IISLFGSLLG WALLAAEIPY VAAKDGVLPK VFAKLNKKGT PSGSLIITNL LVQAFLILTL VASSTYQALY SVASTAILVP YLLSAMYGFK LALTGETYDK DPTGRTRDKI FGGIATVYAI WLCYAAGLKY LLLCFILYAV GIIFFYIGKK QNNKDSVVFV GKEKILAIIV LVIAIIAIVM LFNGAITI
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