Gene CPR_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0139 
Symbol 
ID4205006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp169595 
End bp170170 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content24% 
IMG OID642564694 
ProductBRO domain-containing protein 
Protein accessionYP_697476 
Protein GI110803255 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.598761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGACT TATTTATAAA AAAGTTTAAT GATGAAGAAA TAATAACTCT TATACTTGAT 
AATAGAATTT GTTGGATTGC TAAAGATGTT GCTAAAATAC TTAATTATGA CGATCCCTCT 
AAAGCTATTA ATCAGTGTAT AAAGGCAGAA AAGTTTGAAT ATGGCATAGA GTATGAGGTT 
TTAGCTGGAG ATAAGTTAAA AGAAGTTAAA AGACTTATTG GTGTAACACA CATAAGTTAT 
TTAAAGCAAA CTCCAAAGTT AGTTATATTT TATGAAGAAG GATTATATGG ATTTATAAAT 
TATAGTAAAC TTCCCATAGG GATTAGTTTT AGAAAATGGT TAAGAAGAGA GGTATTACCT 
GAACTTAGGG CTAAAGGAAC TTATTCTATT AATAAAGAAT CTTATAAAGA TAACTTAAAA 
TATAAAAATG AAAATTTATC TTTATATACT CAAGATAAGT TAAATGAGGG AAGAAACTTA 
AGCTTGTTAT TAGAAGTTTT AAATTTAGTT GATAGAATAA CTTCAAAAGA AAATGAAGAT 
AAATTAAGAT ATTTAAATGA TATATTAAAT GGGTAA
 
Protein sequence
MNDLFIKKFN DEEIITLILD NRICWIAKDV AKILNYDDPS KAINQCIKAE KFEYGIEYEV 
LAGDKLKEVK RLIGVTHISY LKQTPKLVIF YEEGLYGFIN YSKLPIGISF RKWLRREVLP 
ELRAKGTYSI NKESYKDNLK YKNENLSLYT QDKLNEGRNL SLLLEVLNLV DRITSKENED 
KLRYLNDILN G