Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0053 |
Symbol | |
ID | 4205445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 59420 |
End bp | 60064 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642564596 |
Product | antibiotic ABC transporter, ATP-binding protein |
Protein accession | YP_697395 |
Protein GI | 110803070 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.633945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAATA GAAATGTTGT AGAAATTTCT AACTTAACAA AAGATATAAA AGGTACAAAA GTACTTAATA AAGTTAATTT ACAACTTGAG AGTGGTAAGG CATATGGAAT AGTTGGTAGG AATGGATCAG GAAAAAGTAT GTTATTTAAA GCTATTTGCG GTTTAATTAA TACAACAGAA GGTAGTATAA CTGTGTTCGA TAAGGTTATA AAAAATGGAA GTTTTCCAGA TGATGTAGGA ATGATTATTG AAAATCCTGG ATTTTTACTT CAATATTCTG CTTTTAAAAA TTTAAAAATA TTAGCTAGTA TAAACAATAA AATAAGTGAT GAAAGAATAA AAGAAACAAT CGCTTTAGTG GGGTTAGATC CTGAAGATAA AAAAATAGTA AAGAAATTTT CTTTAGGTAT GAAACAAAGA TTAGGTATTG CCCAAGCTCT TATGGAGAAT CCTAAACTAT TGATACTTGA TGAACCTATG AATGGTCTTG ATTCAGAAGG TGTAAAACAA ATTAGAGAAA TTTTATTAAA GCTAAAGTCT AACTCTGTTA CAATCTTATT AGCAAGTCAT AACAGTGACG ATATAGATGA AATATGTGAT TGTGTATACA CTATGGAAAA TGGAGTTTTG AGCGCAAGAA TATAA
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Protein sequence | MGNRNVVEIS NLTKDIKGTK VLNKVNLQLE SGKAYGIVGR NGSGKSMLFK AICGLINTTE GSITVFDKVI KNGSFPDDVG MIIENPGFLL QYSAFKNLKI LASINNKISD ERIKETIALV GLDPEDKKIV KKFSLGMKQR LGIAQALMEN PKLLILDEPM NGLDSEGVKQ IREILLKLKS NSVTILLASH NSDDIDEICD CVYTMENGVL SARI
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