Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2961 |
Symbol | |
ID | 4201753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 3225625 |
End bp | 3226797 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638083828 |
Product | putative sugar isomerase |
Protein accession | YP_697315 |
Protein GI | 110801079 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2222] Predicted phosphosugar isomerases |
TIGRFAM ID | [TIGR02815] putative sugar isomerase, AgaS family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA TTTTTGGATT TACTCAAGAA GAATTATCCA GCTTAAAAGC CACTTATACA GCCAATGAAA TATATCAACA ACCAGAATTA TGGAAAGAGA CTTTAAACAT AGTAGAAAAT AATAAAGAAG CTATAAATAA ATTCTTAGAA AAAAATTTAA ATAAAGACAA TGTAAGAATA ATCTTAACTG GAGCAGGAAC ATCTGCCTAT GTTGGAGATA CCATATATCT TTATTTAGCT AAAAAGTTAG GTAAAAGAGT TGAAGCTATA GCAACTACTG ACTTCGTTTC AAATCCAGAT GAATATATAG ATGAAAATGC AAATACCATC TTAGTTTCTT ATGCTCGTTC TGGTAATAGC CCAGAAAGTG TTGGAACTTA TGATTTATTT GAAAAGAAAG TTAAAAATCT AGCACACATA GTTGTTACTT GTAATAAAGA GGGTGAGCTT GCTAAGAAGT CTCAAGAAAA AGAAGGAAAC TTAGTTTTAT TAATGCCAGA AAAATCAAAT GATAAGAGTT TTGCTATGAC AAGTTCCTTT ACTTGTATGA CATTAGCTAC TCTACTTTTA TTTGATATAG CTAATCTAGA AGAAAATAAA AAAATCGTTG AAGAATTAGC TACTAAAGGA CAAGCTTCTC TTGATAATCA ATGGAAAGAT GCAAAAGCAA TTTCAGATTT AGGAGCAGAA AGAATTGTTT ATGTAGGTTC TGGCGCCTTA AAGGGTCTTT GCCATGAAAT GGCTCTTAAA AATTTAGAAT TAACTTCTGG TAAACAAGTT ACTGTTTGTG AATCAATCTT AGGCTTTAGA CATGGTCCTA AGTCAATAAT AAATAATAAT ACTTTAGTTA TATTCTTATG CTCTACAAAT GATTATACAG CTCTTTATGA TTATGACTTA ATAAAAGAAG TTTATAATGA TGAAGGTACT CAAAAGGTTG CTGTTTTAAA TTATTTTGAC AGAGAAAATC TTAAGGAAAT TTCTCATAAA TATATAACAG CTAATGGATC TAAATTAGAT GATACATTTA TAGCATTTAA TTATATAATA TTTGGTCAAA TGATTTCTTT CTTTAACTCT TTAAGACTTG GAATTTCTCC TGATAATCCA AGACCTGATG GAACAGTTAA TAGAGTTGTT CAAGGGGTTA TAATTCACGA ATATAATAAT TAA
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Protein sequence | MNKIFGFTQE ELSSLKATYT ANEIYQQPEL WKETLNIVEN NKEAINKFLE KNLNKDNVRI ILTGAGTSAY VGDTIYLYLA KKLGKRVEAI ATTDFVSNPD EYIDENANTI LVSYARSGNS PESVGTYDLF EKKVKNLAHI VVTCNKEGEL AKKSQEKEGN LVLLMPEKSN DKSFAMTSSF TCMTLATLLL FDIANLEENK KIVEELATKG QASLDNQWKD AKAISDLGAE RIVYVGSGAL KGLCHEMALK NLELTSGKQV TVCESILGFR HGPKSIINNN TLVIFLCSTN DYTALYDYDL IKEVYNDEGT QKVAVLNYFD RENLKEISHK YITANGSKLD DTFIAFNYII FGQMISFFNS LRLGISPDNP RPDGTVNRVV QGVIIHEYNN
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