Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2840 |
Symbol | ksgA |
ID | 4202275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 3104409 |
End bp | 3105266 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638083707 |
Product | dimethyladenosine transferase |
Protein accession | YP_697204 |
Protein GI | 110799025 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATAA ATGAAATAAA AGATATAAAG ACAAAAGAGC TTGTTCAGAA GTATAATTTT AGATTTTCAA AAAGCTTAGG ACAAAACTTT TTAATTGATG ATTCTGTTCC AAGAGATATA GTAAATGGAG CAGATGTTTG TGAAGATGAT TTAGTAATAG AAATTGGACC TGGAGTTGGT ACTCTTACTG TACAATTACT TAAAAGAGCA AAGAGAGTTG TTGCTATTGA ATTAGATAGT TCACTTATTC CAATATTAAC AGCTGAGCTT GGAGATAATC CAAAGTTTCA ATTAATACAT AATGATGCCT TAAAAGTTGA CTTTAATGAA ATTATAGGAG ATGAAAAAAG CGTTAAGCTA GTTGCAAACT TACCTTATTA TGTAACTACT CCTATAATAG TAAATTTATT AAAAGGTGGA TATAACTTTA AATCATTAAC TATAATGATA CAAAAAGAAG TAGCAGAGAG AATGAATGCA GAACCTAATT GTAAAGATTA TGGTGCTTTA TCAATTTTAG TTCAATACTA CTGTAATACT AAAATAGTTA GAAAGGTACC ACCTTCATGC TTCATACCAA GACCAAAGGT TGATTCTATA GTAATAAGAT TAGAAAGATT AGAAGAGCCA AGTGTTAAAG TTAAAAATGA AAAATTATTC TTTGAAATTG TTAGACATGC ATTTAACATG AGAAGAAAAA CTTTATGGAA TGCAACTAAA AATGTAAAAC TTCCTAAGGA ATTAATGGAA AAGGCTTATG AAGAGGCTGG AATAGATCCT AAGAGAAGAG GAGAAACTCT AAGCCTAGCA GAGTTTGGTG CTCTTTCAGA TGCAATAGAT AAATATATGA ATAACTAG
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Protein sequence | MDINEIKDIK TKELVQKYNF RFSKSLGQNF LIDDSVPRDI VNGADVCEDD LVIEIGPGVG TLTVQLLKRA KRVVAIELDS SLIPILTAEL GDNPKFQLIH NDALKVDFNE IIGDEKSVKL VANLPYYVTT PIIVNLLKGG YNFKSLTIMI QKEVAERMNA EPNCKDYGAL SILVQYYCNT KIVRKVPPSC FIPRPKVDSI VIRLERLEEP SVKVKNEKLF FEIVRHAFNM RRKTLWNATK NVKLPKELME KAYEEAGIDP KRRGETLSLA EFGALSDAID KYMNN
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