Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2618 |
Symbol | |
ID | 4201434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2887935 |
End bp | 2888777 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638083485 |
Product | pyridoxamine kinase |
Protein accession | YP_697008 |
Protein GI | 110800563 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.23237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACCTA TGAATAAGAT TGCTGCTATT CATGATATTT CATGCTATGG GAGGGCAGCA TTAGCAACAA TAATACCTAT ATTATCTTCA ATGGGAAATC AAGTATGTCC ACTTCCAACA GCAGTATTGT CAACACATAC AGATGGATTT GGAAAACCAG CAATTAGAGA TTTAAGTGAT TTTATATATG AAACCAAAGA TCATTGGAAA AGACTTAACT TAAATTTTCA ATGCATATAT AGTGGATATT TAGCTGATCC TAATCAAGTT AAATTTGTTG AAAGATTTAT AGAAGATTTT AAGGAAGAGA ATACTTTAGT AGTTATAGAT CCTGTTATGG CTGATAATGG TAAGCTTTAT GATGGTATGA GTGAAAAAAT GATTGAAGAA ATGAGAACTT TAATAAAAAG TGCAGATATA ATCACTCCAA ATATTACAGA AGCTTCTTTT CTTTTAGGAA AAGAATATAA AGAATCTCTA AATGAAGATG AGATAAAAGA ATATTTAGTA GGTCTAGGGA ATTTAGGACC TAAAATAAGT ATAATAACAA GTGTAACAAG TTCAAGAGGA AATGAATATA TTGATACTGT ACTCTATGAT AGAGAAGAAA AAATGTTTTA CACCTATTCT CATAAAAGAA TAAATGCTTT TTATTGTGGA ACAGGTGATG CTTTTGCCTC ATTGCTAATA GGATGGATAT TAAGAGGGGA AAGTATTGAA AAAGCATTGG AGAAGTCATG TAATTTTATT GCAGAAGCTA TAGAATATAG CGAAAAGTTT GATTATCCTC CAAATGAAGG AATATTACTT GAAAGTTTGT TATATAAATT AATAAGTAAA TAA
|
Protein sequence | MKPMNKIAAI HDISCYGRAA LATIIPILSS MGNQVCPLPT AVLSTHTDGF GKPAIRDLSD FIYETKDHWK RLNLNFQCIY SGYLADPNQV KFVERFIEDF KEENTLVVID PVMADNGKLY DGMSEKMIEE MRTLIKSADI ITPNITEASF LLGKEYKESL NEDEIKEYLV GLGNLGPKIS IITSVTSSRG NEYIDTVLYD REEKMFYTYS HKRINAFYCG TGDAFASLLI GWILRGESIE KALEKSCNFI AEAIEYSEKF DYPPNEGILL ESLLYKLISK
|
| |