Gene CPF_2059 details

Gene Information

• Locus tag: CPF_2059
• Symbol: scpB
• ID: 4201482
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2298728
• End bp: 2299315
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 638082924
• Product: segregation and condensation protein B
• Protein accession: YP_696488
• Protein GI: 110798854
• COG category: [K] Transcription
• COG ID: [COG1386] Predicted transcriptional regulator containing the HTH domain
• TIGRFAM ID: [TIGR00281] segregation and condensation protein B

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.830333
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGATA TAAATCAAAT AGAATTTAGT GAAATATCTA AAAAAGACGA GCTTAAGTCT 
ATTATAGAAT CTCTTTTATT TGTTAGTGGA GAACCTCTTG CTTTAAAGGA TATATGTAGA 
ATAGTAGAAG AGGATTTTAA ATATGTAGAA GATTTAATGA GAGAATTAAT GAATATATAT 
AATGGAGATA GTTCAAGAGG GATAAAAATT ATTAGTTTAA ATGGAACTTA TCAGTTAGTT 
ACTAAAACAA AAAATAGTGA ATATGTTCAA AAGCTTTTAA AAAAGAATGT TAGACAATCC 
TTATCTCAGG CTTCTTTAGA AAGTTTAGCA ATAATATGTT ATAAGCAACC TATTACTAGA 
GTTGAGATAG ATGAGATAAG AGGAGTAAAA AGCGAAAGTG CTATACAAAG ACTTGTTGAA 
AAAAATTTAG TTGAGGAAAC TGGAAGATTA GAGGTTCCAG GAAGACCTAT ACTTTATGGA 
ACTACAGATG AATTTTTAAG ACATTTTGCA TTAAATGATT TAGGAGATCT TCCATCTATA 
GAGTTATTTG AAGAAAATGA TGAGGTTTCT GACATGGTGG AAGAGTAG 

 

Protein sequence

MSDINQIEFS EISKKDELKS IIESLLFVSG EPLALKDICR IVEEDFKYVE DLMRELMNIY 
NGDSSRGIKI ISLNGTYQLV TKTKNSEYVQ KLLKKNVRQS LSQASLESLA IICYKQPITR 
VEIDEIRGVK SESAIQRLVE KNLVEETGRL EVPGRPILYG TTDEFLRHFA LNDLGDLPSI 
ELFEENDEVS DMVEE