Gene CPF_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1983 
Symbol 
ID4201669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2221705 
End bp2222262 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content31% 
IMG OID638082852 
Productputative methyltransferase 
Protein accessionYP_696416 
Protein GI110800994 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAA TAGCAGGAAA AGCAAGAGGA AGAAAACTAT TATCACCACC AACATATGAA 
ACAAGACCAA CACTAGATAG AGTAAAAGAA TCAATGTTTA GTATGATTCA ATGGTATATA
CCTGATGCTG TAGTTATAGA TGTTTTTGCA GGAACAGGAA GTTTAGGATT AGAAGCAGCA
AGTAGAGGAG CTAAAGAATG CTACTTAGTT GATAAGAGTC CGGTAACATT CCCTGTTTTA
AAGAAAAATA TAGAAAATTT AGGCTTCGGA GATTTTTGTC ATGCTCTAAA CACAGATGCT
TATTCTGCAT TAAGAAGTTT AGCTTCAAGA GGTAAAGTAT TTGATTTAAT GTTTATAGAT
CCTCCATACA TGAAAAATCT TATTCCAGAA GCTATAGAAA TAATTGAAGA AAAGAACTTA
CTTCAAGAAG ATGGGTTAAT AGTTACTAAA ATAGATTCAA GTGAAGAAAT TTTTGAGGGA
ACTGAAAAGA TAAAGCTTAC AAAAGTTAAG AAGTATGGAA ATACAACAGT TTGCTTTTAT
AAAATAGAGG AGGACTAA
 
Protein sequence
MRIIAGKARG RKLLSPPTYE TRPTLDRVKE SMFSMIQWYI PDAVVIDVFA GTGSLGLEAA 
SRGAKECYLV DKSPVTFPVL KKNIENLGFG DFCHALNTDA YSALRSLASR GKVFDLMFID
PPYMKNLIPE AIEIIEEKNL LQEDGLIVTK IDSSEEIFEG TEKIKLTKVK KYGNTTVCFY
KIEED