| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1960 |
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| Symbol | rnhB |
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| ID | 4202931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2201001 |
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| End bp | 2201819 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082829 |
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| Product | ribonuclease HII |
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| Protein accession | YP_696393 |
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| Protein GI | 110800212 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0164] Ribonuclease HII |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.317166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAATT TAATAAAAGA TATGAGAGAA AATTTAAATT CATACTCTTT TAAAGTAGTA
AGTGATTTAG TAAAAGAGTT AGATGTAAAT AGAGATAACA AAGCTCAAAT AAAAGAACTT
GCTGACTTAT TAAAAGAGGA TAAAAGAAAA AATGTATCAT CTTTAGGAAA TAGATTAGAG
AAGAACCTAA ATAATCTTAT TAAAGAAGAG GAAAGAGTTA AAAATATGTA TCTTTTTGAT
AAGAGTTTTG GTGATTATAA ATATGTAGCT GGAGTTGATG AGGTTGGAAG AGGTCCTTTA
GCAGGTCCTA TAGTTTCAGC AGCGGTAATA TTAGATTCTA GTGATTTAGA TGATATAATT
CTTTACATAA ATGACTCAAA AAAATTATCA GAACATAAAA GAGAAGAGTT AAGTGAGATC
ATAAAAGAAA AAGCCTTAAG TTACTCCATT TCAATGTGTG ATAGCAAGGA AATAGATGAA
AAAGGCATAG GATACTGTAA TAATCATGTA TTCATAAAAG CTTGTGAAGG ACTTAGTATA
AAGCCAGATT TAGTCCTTTC AGATGGATAT TTAATAAAAA ACTTTAATGG AGAAAATAAG
CATGTTATAA AAGGCGATAC AAAAAGTGCT TGTATAGCCT GTGCTTCAAT AATTGCAAAA
GTTTATAGAG ATAATATTAT GAAGGAATAT CATAAAAAAT ATCCACAATA TGATTTTGAA
AAAAATGTTG GTTATGGAAC CAAGACTCAT GTAGATGCTT TAAAAGAAGT AGGACCTACA
GAAATTCATA GAATGAGTTT TTTAAAGAAT ATTCTATAG
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| Protein sequence | MDNLIKDMRE NLNSYSFKVV SDLVKELDVN RDNKAQIKEL ADLLKEDKRK NVSSLGNRLE
KNLNNLIKEE ERVKNMYLFD KSFGDYKYVA GVDEVGRGPL AGPIVSAAVI LDSSDLDDII
LYINDSKKLS EHKREELSEI IKEKALSYSI SMCDSKEIDE KGIGYCNNHV FIKACEGLSI
KPDLVLSDGY LIKNFNGENK HVIKGDTKSA CIACASIIAK VYRDNIMKEY HKKYPQYDFE
KNVGYGTKTH VDALKEVGPT EIHRMSFLKN IL
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