| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1882 |
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| Symbol | rbsA |
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| ID | 4203133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2118156 |
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| End bp | 2119661 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082751 |
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| Product | ribose ABC transporter, ATP-binding protein |
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| Protein accession | YP_696315 |
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| Protein GI | 110801212 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.102904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTGAAA GAACACCAAT GCTAAAAATG GTAGGTGTAT CAAAATCCTT TCCAGGAGTC
AAAGCTTTAG ATAATGTTAG TTTAATGGCT TATGGTGGAG AAGTTACTGC TTTAATGGGA
GAAAATGGAG CAGGGAAATC AACTTTAATG AAAATACTAA GTGGAGTATA TAAAAAAGAT
GAAGGTAAGA TATTCATTGA AGGAAGGGAA GTAGAAGTAA AGGGAATTAA ATCAGCAGAA
GAAGCTGGTA TAACAATAAT TCACCAAGAA CTTAGTGTTT TAAATAACTT AACTGTTTCA
GAAAATATAT TTTTAGGTAA TGAAAAACAT AGTAAATTTA CAGGAAGAAT AAATAAAAAA
TTATTAGATG AAAGAAGTAA AATGTTCTTA GAACAAATTG GTTGTGATAT AGATCCAAAT
AGATTAGTTA GTACTCTTAA TGTAGGTGAA AAGCAAATGA TAGAAATAGC AAAAGCTTTA
ACTAAGAATG CTAGAATAAT TATTATGGAC GAACCTACTA CAGCCTTAAC TGATGTAGAG
ACTGAAAACC TTTTTAAAGT AATAGAGAAT TTAAGAAAAA AGGGAATAGC AATAATATAC
ATATCACATA GAATGGAAGA AATATTTAAA ATATGTCATA GAGTAGAAGT ATTAAGAGAT
GGTAAATATG CAGGAAGTGC AGAAATAAAA GACATAGATA ATGATAAGCT TATAGCAATG
ATGGTTGGAA GAACCATAGA GGATCAATTT CCATACAGAG ATGTTAAAAA AGGAGATTTA
GCTTTAGAAG TTAAAAATCT TAGCTGTAAG GAAGGAGTTA AAGGAGCTTC ATTTACTCTT
AGAAAGGGAG AAATATTAGG AATTGCAGGT CTTATGGGAT CAGGCAGAAC AGAGCTTGCA
AAAACAATAT TTGGAGAATA TAAAAAAACA AGTGGTGAAA TTTCTTTAAA TGGAAGTCCT
ATTAATATAA ATTGCATAAG TGATGCCATA AATAATGGTA TATGTTATCT TTCAGAGGAT
AGAAAAAAAG AGGGATGTAT TTTAGGAATG TCTGTTGGAG AAAATATGAC CTTATGTAAC
TTAAAGAAAT ATGAAAATAA GTTTAAATCT CTTGATAAAA AAGAAGAAGC AAAGGATATA
GAGTACTATA TTAAGAAGAT AAACATAAAA ACTCCAAATA AGGAACAATT TATTAAGAAT
TTAAGTGGAG GTAATCAACA GAAGGTTATA CTTGCTAAAT GGCTTATGCT ATCTCCAGAA
GTATTAATAA TTGACGAGCC AACTAGAGGA ATAGACGTAG GTGCAAAGAA AGAAATTTAT
GAACTTTTAA ATGAACTTAA AGCTAGTGGA AAAGCCATAA TAATGATTTC TTCAGACTTA
CCAGAGGTTT TAGGAATTAG TGATAGAATT ATGGTTATGA GTGAAGGAAG AATCTCTGGG
GAATTAAATA GAGATGAAGC AAACCAAGAA AGTATAATGA AATTAGCCGT TGGAATAAAC
AATTAG
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| Protein sequence | MGERTPMLKM VGVSKSFPGV KALDNVSLMA YGGEVTALMG ENGAGKSTLM KILSGVYKKD
EGKIFIEGRE VEVKGIKSAE EAGITIIHQE LSVLNNLTVS ENIFLGNEKH SKFTGRINKK
LLDERSKMFL EQIGCDIDPN RLVSTLNVGE KQMIEIAKAL TKNARIIIMD EPTTALTDVE
TENLFKVIEN LRKKGIAIIY ISHRMEEIFK ICHRVEVLRD GKYAGSAEIK DIDNDKLIAM
MVGRTIEDQF PYRDVKKGDL ALEVKNLSCK EGVKGASFTL RKGEILGIAG LMGSGRTELA
KTIFGEYKKT SGEISLNGSP ININCISDAI NNGICYLSED RKKEGCILGM SVGENMTLCN
LKKYENKFKS LDKKEEAKDI EYYIKKINIK TPNKEQFIKN LSGGNQQKVI LAKWLMLSPE
VLIIDEPTRG IDVGAKKEIY ELLNELKASG KAIIMISSDL PEVLGISDRI MVMSEGRISG
ELNRDEANQE SIMKLAVGIN N
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