Gene CPF_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1804 
Symbol 
ID4201185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp2037275 
End bp2037811 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content23% 
IMG OID638082674 
Productsignal peptidase I 
Protein accessionYP_696238 
Protein GI110800529 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0785426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGCT TTAATTATAT TTTAGATCTA CCTGATAGCT TTTTTAAGAT TATAATAACC 
ATATTAATAT CCTTAATTCT AATTTTAGGT TTCTTCTTAA ACAATATATT CATAGCTGTT 
GTTGATGGCT CTTCAATGGA AGATACTATT CATCACGGTG ATGTATTAAT TATAAATAAA 
AAATCCTATT CCACTTCTTC TCCTAAAAGG TATGATATAG TAAATATTTA TGCCCCTTGT 
AAATATGATA ATTTTCTAGT TAAAAGAATC ATAGGTCTTC CTGGTGATAC AATTGAAATA 
AATAATTCTG AAGTATATGT AAATGGTGAT AAAATTTATG AATCATATAT AAAAGAAGAA 
ATGAATCTTC CTTATTATTT AAAATTAAAA ATACCTAAAG ATAAATTCTT TGTTATGGGT 
GATAATAGGA ATATAAGTTT AGATTCTAGA TATTTTGGAC TAGTAAAAAG TACTGATATT 
CAAGGTAAGG CAATATTTAA ATATTGCTAT AAGAATCATA AATTTAAACT CTTTTAA
 
Protein sequence
MKCFNYILDL PDSFFKIIIT ILISLILILG FFLNNIFIAV VDGSSMEDTI HHGDVLIINK 
KSYSTSSPKR YDIVNIYAPC KYDNFLVKRI IGLPGDTIEI NNSEVYVNGD KIYESYIKEE 
MNLPYYLKLK IPKDKFFVMG DNRNISLDSR YFGLVKSTDI QGKAIFKYCY KNHKFKLF