Gene CPF_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1713 
Symbol 
ID4203500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1937175 
End bp1937585 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content26% 
IMG OID638082585 
ProductFUR family transcriptional regulator 
Protein accessionYP_696149 
Protein GI110799565 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0366911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTAA AAGAAATATT TAAAGCTAAT GGTGTTAAAG TTACCAAAGC TAGATTATTA 
ATATATGATT TGTTAAAGGA AAGTGATAGA AGTGTTACTG CCGATTATAT ATATAGTAAA
TGTAAAGAGA TAAATTTATC TACTGTCTAT AGAACTCTAG AGGTATTTTT AGAGAAGGAT
TTAGTAGATA AGTTTGAATT AGGAGATGGA AAAAGTTCTT ATAAATTAAA GAATAGAAAT
ATTCATAAGC ATATTTTAGA ATGTGATTTA TGTCATAAAG AAATAGAAGT TCCATGTCCT
ATGCAACAGA TTGAGGAGCT TTTAAGAAAT CAAACAGGAT TTAAAGTAAA AGAGCATAAT
CTTACTTTAA AGGGTATATG TGAAGAGTGT ATAAATAATA AGAAAAAATA A
 
Protein sequence
MEVKEIFKAN GVKVTKARLL IYDLLKESDR SVTADYIYSK CKEINLSTVY RTLEVFLEKD 
LVDKFELGDG KSSYKLKNRN IHKHILECDL CHKEIEVPCP MQQIEELLRN QTGFKVKEHN
LTLKGICEEC INNKKK