Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1703 |
Symbol | |
ID | 4203512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1925590 |
End bp | 1926219 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638082575 |
Product | putative ribonuclease HI |
Protein accession | YP_696139 |
Protein GI | 110799769 |
COG category | [R] General function prediction only |
COG ID | [COG3341] Predicted double-stranded RNA/RNA-DNA hybrid binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0820498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAA AATATTATGC TATAGCAAAA GGAAAATCAG GGATTCCTAA GATTGTTGAG ACTTGGACAG AATGCCAAAA AGAAGTAATA GGATGTAAAG GCGCTAAGTA CAAAAGTTTC GCTTCAAAGG AAGAGGCAGA AAAGTTTATT TCTATTCATG AAAATGGAGG AAGCTTTGAG GAAGTTAAAG GAAATGAAGA GGTTAAGGAT GATTTAATTT ATATTTACGT AGATGGTAGC TTTATGGTTT CTAAAGAAAA TTATTCTTAT GGCTTCTTAG TAGTAAAAAA TGATGAAATA TTATATGAAG ATAATGGTGT TGGATATGAT AAAGAAGCAA TAGCTCTAAG AAATGTATCC GGAGAAGTTG AAGGAGCTAT GAAGGCAATT GAATATGCCA TAGAAAATGG ATATAAAGAT ATAGTTCTTT GTTATGATTA TCAAGGAATT GAGAGCTGGG CTTTAGGAAC TTGGAAAAGA AATAATAGAA TAACTCAAAA TTATAATGAG TTTATGCAAG AAAAATTTAA ACTCATAAAG GTTAGATTTA AAAAAATAAA AGGACACAGC GGAAATAAAT TTAATGATAG GGCAGATATA CTTGCCAAAA AAGCATTAGA AAGTCTTTAA
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Protein sequence | MAKKYYAIAK GKSGIPKIVE TWTECQKEVI GCKGAKYKSF ASKEEAEKFI SIHENGGSFE EVKGNEEVKD DLIYIYVDGS FMVSKENYSY GFLVVKNDEI LYEDNGVGYD KEAIALRNVS GEVEGAMKAI EYAIENGYKD IVLCYDYQGI ESWALGTWKR NNRITQNYNE FMQEKFKLIK VRFKKIKGHS GNKFNDRADI LAKKALESL
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