Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1662 |
Symbol | |
ID | 4203785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1878024 |
End bp | 1879595 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638082537 |
Product | voltage-gated chloride channel family protein |
Protein accession | YP_696101 |
Protein GI | 110799945 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTAATG AGAGTACGAA AAAAGTACTG TCACATAGAA AGGATTTAAG ATTTAAATTA GTTCTAGAAG GTGCTGCCAT AGGACTTTTA TGTTCTTTAG TTTTAGTACT AAATAGAATT ATTGTTAATT ACTTATTTCC ACTTTTTAAA AAGCTTTATG CATGGGCAGC ATTAAGTATA ACTAATATGA TTATAGTTTT AGTTATATTA GCTATTTTAG GAGCACTTGT TGGATTTATG GTTAGAAGAG AGCCTATGAT TTCAGGAAGT GGTATTCCTC AAGTTGAAGG AGAATTAATT GGTAAACTTA AAATGAATTG GCTAAAGATT TTAATTTATA AGTTCTTAGG AGGAGTAATT TCCTTAGGAG CTGGATTGTC TTTAGGTAGA GAAGGCCCAT CAGTACAAAT GGGAGCCGCT GTAGGAGAAG GATTTAGTAA TGGTTTAAAA AGAATAAATA TAGAGAAAAA ATATTTAATA ACCTCAGGTG CTTCAGCTGG TTTAGCAGCA GCATTTAATG CACCTTTATC AGGGGTAATA TTTGCCCTAG AAGAGGTACA TAAGAGTTTC TCACCTTTAG TTTTAGTTTC TGCAATGGCA GCATCCTTAG TATCTGATTT TGTTTCAAAA CAATTTTTGG GAATGAATCC TAGTTTAGGA ATAGAAAATG TTCCTGTATT ACCTTTAAAG TATTACTGGG TATTAATAAT ATTAGGAGTA ATTTTAGGTA TAGGTGGTGC AATATTCTCA AAGGGAATTT TAAAAGTACA AAGTTTATAT GGAAAGTTTA AAAATGTTCC TGTAGAAGTT AAGGTAATGA TTCCTTTCTT ATTAACAGGT ATATTAGGTA TTTTCGCACC AATAATACTA GGTGGTGGAC ATGAACTTAT AATGGATTTA GCAACTAAGA GCTTTCCAAT AAAGCTTCTT TTAGCTGTGC TTTTAGTTAA ATTTTTATTA ACTATTATAA GTTTTGGTGC AGGTACACCA GGTGGTATAT TCTTCCCACT ATTACTTTTA GGTGCAGTAG TAGGAAATAT AGTTGGAATA GTAAGTTGTA ATGCATTTGG AGTTCCAAAT CAATATATAA TAGATTTTAT AATATTAGCT ATGGCAGGTA ACTTTGCTTC AATAGTAAAG GCACCTATTA CAGGTATAAT ACTTATTACA GAGATGACTG GTTCTTTTGA ACATATGCTA GCTTTATCTG TAGTTGTAAT AATTTCCTAT GTAACATCTG ACTTACTAAA AAGTGAACCA ATATATGAAT CTTTATTAGA AAGATGGATA GAAAAGGTTG GTTCAGAAGT AGAAGAACCT TCTAATAATA AAACTCTATT AGAGGTTGGA GTAGAACTTG GTAGTGAAGC AGAAGGAAAA GAAATAAAAG ATGTTAATTG GCCAGAGACA GCTCTTTTAG TTGCAATAAA AAGAGGAAAT AACGAAATAA TCCCTAAGGG ATCTATTGAA ATACAAAGTG GAGATTATTT AGTGGTTATG GTAGATGAGA GCAGGGCAAG CTCTGTCTTA GAAGAAATTC AATTCTTAAC CTCTGCTAAA GAAGAAATTT AA
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Protein sequence | MSNESTKKVL SHRKDLRFKL VLEGAAIGLL CSLVLVLNRI IVNYLFPLFK KLYAWAALSI TNMIIVLVIL AILGALVGFM VRREPMISGS GIPQVEGELI GKLKMNWLKI LIYKFLGGVI SLGAGLSLGR EGPSVQMGAA VGEGFSNGLK RINIEKKYLI TSGASAGLAA AFNAPLSGVI FALEEVHKSF SPLVLVSAMA ASLVSDFVSK QFLGMNPSLG IENVPVLPLK YYWVLIILGV ILGIGGAIFS KGILKVQSLY GKFKNVPVEV KVMIPFLLTG ILGIFAPIIL GGGHELIMDL ATKSFPIKLL LAVLLVKFLL TIISFGAGTP GGIFFPLLLL GAVVGNIVGI VSCNAFGVPN QYIIDFIILA MAGNFASIVK APITGIILIT EMTGSFEHML ALSVVVIISY VTSDLLKSEP IYESLLERWI EKVGSEVEEP SNNKTLLEVG VELGSEAEGK EIKDVNWPET ALLVAIKRGN NEIIPKGSIE IQSGDYLVVM VDESRASSVL EEIQFLTSAK EEI
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