| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1381 |
|---|
| Symbol | pyrE |
|---|
| ID | 4201573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1555312 |
|---|
| End bp | 1555890 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638082262 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | YP_695827 |
|---|
| Protein GI | 110801266 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase
[TIGR01367] orotate phosphoribosyltransferase, Thermus family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000390068 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA CAGACGCTAT GGTTATAGAT ACATTAAAAG AGGTTGGAGC ATTATTAGAA
GGACATTTCT TATTATCATC AGGAAGACAC TCAAATAGAT ATTGCCAATG TGCTCAATTA
TTAAAATACC CAGAAAAAGC TGAGAAAGTA TTAAAGGTTG TAGCTGATCA GTTAAAAGAT
ATAGACTTTG ACTTAGTTGT AGGACCAGCT ATGGGAGGAG TTATAGTAGC TTACGAATTA
GGAAGACAGT TAGGTAAGCC TGCAATCTTT ACTGAAAGAG AAAATGGCGA AATGACTCTA
AGAAGAGGAT TTACTATAGA AAAAGGACAA AAGGTAGTAA TAACAGAGGA TGTTGTAACT
ACAGGTAAGA GTTTTAAGGA AGCTGCAAAG GTGATTGAAG AACAAGGTGG AGAAGTTGTT
GCAGTAGTTT GTATAGTAGA TAGAACTCCA GGCAATGTAA CAGATTTCCC AATGTATAGT
TCAATAAAAC TTGATATAGA AAGCTTTGAG GCAGAAAATT GCCCACTATG TAAAGAAGGA
GTGCCTTACA TAAAACCAGG AAGCAGAAAT ATAAAATAA
|
|---|
| Protein sequence | MKNTDAMVID TLKEVGALLE GHFLLSSGRH SNRYCQCAQL LKYPEKAEKV LKVVADQLKD
IDFDLVVGPA MGGVIVAYEL GRQLGKPAIF TERENGEMTL RRGFTIEKGQ KVVITEDVVT
TGKSFKEAAK VIEEQGGEVV AVVCIVDRTP GNVTDFPMYS SIKLDIESFE AENCPLCKEG
VPYIKPGSRN IK
|
|---|
| |