| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1346 |
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| Symbol | |
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| ID | 4202394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1519004 |
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| End bp | 1519474 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638082227 |
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| Product | MerR family transcriptional regulator |
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| Protein accession | YP_695792 |
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| Protein GI | 110799202 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000136372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAACT TTGAAAAACT TTATACTATT GAAGACATAG CAAAGATGAC TAGACTTACT
TCACGTACCA TTAGAAACTA TCTTAAAGAT GGAATATTAG AAGGCAAGAA AATTGGTGGG
CAATGGAGAT TTACTATGAA GGATATTGAA AACTTTTTTG ATAACAGTAA ATCTAAAGAA
GAGGTAAGAG CTACCCAAAA TAATGAAGTA CTTGATTTTT TAGAAGGGAA AAATGTAGAT
TCACAAAAAG AAGTACAGAT CTGTACTATA ATAGACCTTC ATTGTAAAAA TATATTAGAA
GGAAAAGAAT TATCTAAAAA ATTAATTACA ATAATAAATG AAGATGAAGA GGCTGTTAAA
AATGGTGCTA AATTTTCTTA TGAATATATA AAAGAATCTT CTAAAGCACG TTTTACTCTA
TTTGGAGATC CTGAATTCAT AATAAAAACA TTAAAAACCC TTGAAAAATA A
|
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| Protein sequence | MNNFEKLYTI EDIAKMTRLT SRTIRNYLKD GILEGKKIGG QWRFTMKDIE NFFDNSKSKE
EVRATQNNEV LDFLEGKNVD SQKEVQICTI IDLHCKNILE GKELSKKLIT IINEDEEAVK
NGAKFSYEYI KESSKARFTL FGDPEFIIKT LKTLEK
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