Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1288 |
Symbol | |
ID | 4201483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1462223 |
End bp | 1463023 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 638082169 |
Product | choline/ethanolamine kinase family protein |
Protein accession | YP_695734 |
Protein GI | 110798855 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.006168 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAACA AAATGAAAAA TCATAAGATA ACCAAACTAG GCGGTCTTAA TAACTCAAAT TATTTATTAG AGTGTGAAAA TAATAAATAT GTTTTAAGAA TACCTAGTAA AGATAATAAA AATAATTTTT CAGAGGAAAA TTTTGTTTTA ATATTTGCTA ATTTGAACAA GCTATCCCCC CCTATTATAT ATCATAATAA GGATAATGGA ATACTAATAA GCAAATTTTT AGAAGATTCA AAGGTAAATA TGAGTACATT TACATCTTTA GAATTCCTTG AAAAACTCTC AATTAATTTA AAAAAACTAC ATATTCTTAA GTGTGAACAT ATTTTTAACC CTTTTGAACA TATAAGAAAA AATTTTCATA TTTTAAAATC TAAAAACTTT AATTTTCATG AAGGCATTGA TTTAGTCTTA AATAAATTAA ATATTCTTGA AGAAAAATTA AGCAAAAATA TGACTCTTGG CCTTTGTCAT AACGATTTAA ATTCTTCAAA TGTACTATAT CATAATAAAA ATGTTCTTTT TATTGATTTT GAATTTTCTG CTATGTGTGA TATATTTTTT GATTTAGCTA CTGTATCTTG GATGCTTGAT GAAAAAAAGA GATATTTTTT AATAAAAAGT TATTTTGGCT ACTACTCTTA TGAATTAATG GAAAAATTAG AAAATTACCT TTTTGTAGTT AAGCTTTGGA ATGCTTCTTG GAGCTTCTTA AAGTCTTTAA ATACTAATTC TACATATGAT TATAAATTAG GTGGAAATAT GATCATAGAT GATTTATTAT CCACTCTATA A
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Protein sequence | MTNKMKNHKI TKLGGLNNSN YLLECENNKY VLRIPSKDNK NNFSEENFVL IFANLNKLSP PIIYHNKDNG ILISKFLEDS KVNMSTFTSL EFLEKLSINL KKLHILKCEH IFNPFEHIRK NFHILKSKNF NFHEGIDLVL NKLNILEEKL SKNMTLGLCH NDLNSSNVLY HNKNVLFIDF EFSAMCDIFF DLATVSWMLD EKKRYFLIKS YFGYYSYELM EKLENYLFVV KLWNASWSFL KSLNTNSTYD YKLGGNMIID DLLSTL
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