Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1273 |
Symbol | |
ID | 4202887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1448552 |
End bp | 1449286 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638082154 |
Product | putative branched-chain amino acid aminotransferase |
Protein accession | YP_695719 |
Protein GI | 110800303 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0299585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGAAA AATGTTCACT TACCATAGAT TCTTCTGTTT TTTTTGGACG GGGAATTTTT GAAACTATAC TTGTATTAAA TAATGGAGTG TTTTTAAAGG AACATCTAGA AAGACTAAAA GATGGATGTT TAAATTTAAA TATTCCTTTT AATATTAATG AAGAGGAATT AAGAGAGTTT ATTAAAAATG AAAAAATAAG AAATAAGGCT TTAAAAATAA CTCTTACTGA AAAAAATATA ATTTATTCAA CTAGAGATAT TCCTTATGGC ATAGAAGATT ACAATAGAGG ATTTTCTCTA AAACTTAGTG AAGTAAGAAG AAATAGAACC TCTAAATTAA CTTATTTAAA GAGCACTTGC TATATTGAAA ATATTATGGA AAAGGAAAAG GCTAAAGATG AAGGCTTTGA TGAAGTGATA TTTTTAAATG AAAGAGAAGA GCTAACAGAA GGGGCTACTA GTAATATATA TTTTATTAAG AATAATAAGA TATGTACTCC AAAGGTTAGC TGTGGTCTTT TAGATGGAAT AATTAGAGGA TGGATAAAGA ATAACTTTCA AGTTGAAGAA GGATGTTATA ATATAGAAGA CTTAAGAAAT AGTGAAGGGA TTTTTATAAG CAATTCTCTT CTTGGAATAA TGCGAGTAAG TCAATTTGAA GAAGAATTTT TTGGGGAAAA AGATTTAATA GAAGAAATAA AAAGTAAATA TGAAAGTTCT ATTATAAGCT TTTAA
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Protein sequence | MVEKCSLTID SSVFFGRGIF ETILVLNNGV FLKEHLERLK DGCLNLNIPF NINEEELREF IKNEKIRNKA LKITLTEKNI IYSTRDIPYG IEDYNRGFSL KLSEVRRNRT SKLTYLKSTC YIENIMEKEK AKDEGFDEVI FLNEREELTE GATSNIYFIK NNKICTPKVS CGLLDGIIRG WIKNNFQVEE GCYNIEDLRN SEGIFISNSL LGIMRVSQFE EEFFGEKDLI EEIKSKYESS IISF
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