| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1192 |
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| Symbol | |
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| ID | 4201133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1357715 |
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| End bp | 1358404 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638082073 |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_695638 |
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| Protein GI | 110798796 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00982401 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAATT CAGAAAGTAT TTTAATAGTT GAAGATGATA TAGATATAAA TAATTTATTG
AGTAAAATTT TAGAGAAGGA AGGGTTTAAA GTTAGACAAG CATTTTCAGG ATCTGAAGGT
AAGATGTGTT TAGAATTTTT TGATTTTGAT ATGGTACTTT TAGATCTTAT GCTACCAGGT
ATAACTGGTG AAATATTTAT AGAGGAGATT AGAAAGATAA AGAACACTCC AATAATAGTT
ATATCAGCAA AAACTGCAAT GGAGGATAAG ATAAATGTTT TAAAATTAGG TGCTGATGAT
TTTATAAGTA AACCTTTTGA TGTTAATGAA GTTTTAGCTA GGGTTGAAGC GCTTTTAAGA
AGAAGTAAAA TAACAAATTC AAGTGAAGGT GTAGAGACAA TAAAATATAA GAACCTTATA
TTAGAACCTA GAAGTAGAGA AGTTAAGGTT AAGGGAGAGG AAATACAACT TACTTCTAAA
GAGTTTAAAA TATTAGAACT TTTAGTTTGT AATCCAAAGA AAGTTTTTAC TAAGGCAAAC
TTATTTGAAA CAGTATGGGA AGAGGAGTTT TTAGGTGATG ATAATACTAT AAATGTTCAC
ATAAGCAATC TTAGAAATAA GATAAATCTT TTAGATAATG AAAATGATTA TATAAAAACT
ATTTGGGGAG TAGGCTTTAA AATGGATTAG
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| Protein sequence | MINSESILIV EDDIDINNLL SKILEKEGFK VRQAFSGSEG KMCLEFFDFD MVLLDLMLPG
ITGEIFIEEI RKIKNTPIIV ISAKTAMEDK INVLKLGADD FISKPFDVNE VLARVEALLR
RSKITNSSEG VETIKYKNLI LEPRSREVKV KGEEIQLTSK EFKILELLVC NPKKVFTKAN
LFETVWEEEF LGDDNTINVH ISNLRNKINL LDNENDYIKT IWGVGFKMD
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